KEGG   Vibrio harveyi: AL538_01980
Entry
AL538_01980       CDS       T04380                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
vhr  Vibrio harveyi
Pathway
vhr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AL538_01980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vhr03400]
    AL538_01980
Enzymes [BR:vhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     AL538_01980
DNA repair and recombination proteins [BR:vhr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AL538_01980
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AL538_01980
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AL538_01980
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AMF96585
UniProt: A0A454B398
LinkDB
Position
1:447868..449289
AA seq 473 aa
MHQDNQPTFFFFDYETWGTSPAKDRPSQFAGVRTDENFNIIGEPLVMYCRPPADYLPSPE
AALITGITPQKAMQEGLPEPEFIAKIHAELSKPKTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIEMAKKVKAAQPKLFDYFFSMRNKRKLNELVDIVNMIPLMHVSGMLGRECQY
TSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGDLLPVPVKLVH
LNKCPILAPAKTLTAENAEVIGIDRQQCLNNLALLRQHPEIREKLISLFSIEREFEKSND
VDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRARHYAGTLDEQ
EQRRWAQHCREVFESQIEEYMMNLENLVHEHESDEKKIAILKSVYRYVESLAS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaccaagacaatcagcccacttttttctttttcgattacgagacttggggaacaagt
ccagccaaagaccgcccaagccagtttgctggcgttcgcactgatgaaaacttcaatatc
attggtgaacctttggtgatgtactgtcgtccacctgctgattaccttccttcgccagaa
gcagctttgatcactggtattacaccacaaaaagcaatgcaagaaggcttacctgaacct
gagtttattgccaaaattcatgctgaattgtctaaaccaaagacgactagccttggctac
aacagcatacgttttgatgatgaagtcactcgttacacttgctaccgaaacttcatcgac
ccatacgcatggagctggcaaaacggcaactcacgatgggatttgcttgacgtgatgcga
gcatgtcatgccctgcgtcctgaaggcgtagaatggccagagaacgatgaaggctttaca
agcttcaagctagagcatttatccgtagcgaatggcattgaacacagcaatgctcacgat
gcgatggccgacgtgattgccacgattgaaatggcgaagaaagttaaagccgcccaacct
aagctatttgactactttttctcgatgcgtaacaagcgcaaactcaatgagctggttgat
attgtcaatatgattccgttgatgcatgtatcaggcatgcttgggcgtgaatgccaatac
acaagctggattgtgcctgtggcttggcacccaaccaacaacaacgctgttatcacgatt
gatttagccaaagatcctcagccgatccttgaactttcagcggaagaactgaaagaacgc
ttgtacaccaagcgtgacgaattgggcgacttactgcccgtaccagtgaagctagtgcat
ctgaacaagtgccctattctcgctccagcaaaaacattaaccgcggaaaatgcggaagtc
attggtattgaccgccaacaatgtttaaacaatttagcgttgttgcgccaacacccagag
atccgagagaagctgattagtctattctctatagaacgtgaattcgaaaagagtaatgac
gttgatacgcagctttacgatggctttttctcgcctgctgatcgcgctgctatggacatc
attcgtgaaaccgatccgaataacttagccgcactggacattgaattcgatgataaacga
atcaagccattgcttttccgttaccgtgctcgccattatgcaggcacattagatgaacaa
gaacaaagacgctgggcacaacattgtcgtgaagttttcgaaagtcagattgaagagtac
atgatgaatttagaaaacttagttcacgaacatgaaagtgacgaaaagaagatagcaata
ttaaaatccgtctatcgttatgtagagagcctagcctcctaa

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