Vagococcus hydrophili: G7082_04225
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Entry
G7082_04225 CDS
T07081
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vhy
Vagococcus hydrophili
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vhy03009
]
G7082_04225 (rsmB)
Enzymes [BR:
vhy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
G7082_04225 (rsmB)
Ribosome biogenesis [BR:
vhy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
G7082_04225 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_15
Methyltransf_24
Methyltransf_25
TRM
Ubie_methyltran
Methyltransf_11
Methyltransf_3
FtsJ
Met_10
DnaB_2
Methyltr_RsmF_N
BpsA_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QIL47804
UniProt:
A0A6G8ARW2
LinkDB
All DBs
Position
complement(870504..871874)
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AA seq
456 aa
AA seq
DB search
MNKNRKLPRKVYESPRLAALELLVQVSEEDAYSNLLVKEYITKHRLSEKDGRLMTEIVYG
TISRKLTLEYGLTNFVEDTSKIDNWVKQLLLMSLYQMEYLDKVPEYSVISEAVEIAKAKS
NPGIGRYVNGVLRSVQREGLRPTEEIKNKVKRLSTEISIPKWLTKRLVDTIGFEETEKLG
QSLLMPSKASARVNTHLISREEAITRLEEEGIFAEESTVSPVGIVAKKGFLAGSTLFKEG
LLTVQDESSMLVAPSMQIKPDAKILDACAAPGGKTVHMAIYLDEAKGGKITALDIHEHKL
KLIEENTERLGVSNVVETHLLDAREVATAFPDESFDHILVDAPCSGLGLLRRKPDIKYSK
KLEDILELQEIQLAILESVVTKVAQCGIITYSTCTIAPEENQEVINKFLEKHPNFEKIDI
DGAENIPMSYHDQMVQVYPHHYQTDGFFICCLKKKQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaatagaaaattaccaagaaaagtatatgaatcaccaaggttagccgctctt
gaattattggttcaagtatcagaagaagacgcgtactcaaatcttttagtgaaggagtat
atcaccaaacaccgtctttctgaaaaagatggtcgtttgatgacagagattgtctacggt
acgattagtcgaaaattaactttagaatatggcttaactaattttgtagaagatacctct
aaaattgataactgggtaaaacaactcttattgatgtcgttataccaaatggaatatttg
gataaagttccagaatacagtgtgattagtgaagcagttgaaattgcgaaagctaaaagt
aatccaggaattggtcgttacgtgaatggtgttttaagaagtgttcagcgtgaagggtta
agaccaactgaggaaattaaaaataaagtgaaacgtctatcgacagaaattagtattcct
aagtggttaacgaaacgattagttgatacgattggttttgaagagacggaaaaactaggt
cagtcacttttaatgccgagtaaagcgagcgctcgagtgaatactcatttgattagccgt
gaagaagctatcacgcgccttgaagaagaggggatttttgcagaagaaagtacggtttct
ccggtggggattgttgctaaaaaaggtttcttagcaggaagcactctttttaaagaagga
ttgttaacggttcaagatgaaagctcaatgttagtggcaccaagtatgcaaattaagcca
gacgctaaaatattagatgcttgtgcggcaccaggcggtaaaaccgttcatatggcaatt
tatttagatgaggctaaaggtggtaaaattacggctttagatattcatgaacacaaactg
aaattaatcgaagaaaacacagaacgtttaggtgtttcaaatgttgttgaaacgcatctt
ttagatgctagagaagtggcaacggctttcccagatgaaagttttgatcatattttagta
gatgcaccttgttctggcttaggtttattacgccgcaaaccagatattaaatacagtaaa
aaactagaagatatcttggaacttcaagaaatccaactagcaattttagaaagtgttgtt
acaaaagtagcgcaatgcggtataataacgtatagtacttgtacaattgccccagaggaa
aaccaagaggtaattaacaagtttttagaaaaacatcctaactttgaaaaaattgatatt
gatggggcagaaaatataccaatgagttatcatgatcaaatggtacaagtttaccctcat
cactatcaaactgatggattttttatttgttgcttaaagaaaaagcaatag
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