Viridibacillus sp. JNUCC-6: JNUCC6_07330
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Entry
JNUCC6_07330 CDS
T06874
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
vij
Viridibacillus sp. JNUCC-6
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
HTH_8
PAS_4
PAS_8
AAA_2
AAA
AAA_5
DapB_N
PAS_10
PAS_7
Mg_chelatase
AAA_3
NAD_binding_3
Glu_dehyd_C
GFO_IDH_MocA
PglD_N
Sacchrp_dh_NADP
GARS_N
HTH_28
MurD-like_N
HTH_50
NAD_binding_8
AAA_16
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QOV12557
UniProt:
A0A7M2QYL0
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Position
complement(1480738..1482786)
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AA seq
682 aa
AA seq
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MQNILIIGAGAGGTAILQLLSKSEQLSTVAIVDIREDAPGVVLAREAGIDTEQDWRVVLT
DEIDMVVDVTGEPAVFEELLQALPKRTVLIPGTIAYLIVQLLNEKDYYINKTQHAAYKQQ
IIFNSIEEGMIGIDPQGQIIFFNRSAARMTDVTVKEAIGKHINDIIINSALPRVFESGIA
EINQELKLSNDKKIVTSRFPMIDGSGNRIGAFAVFKDISEVVNLAEEITNLKEIQMMLEA
IIQSSDDAISVVDEKGRGILVNPAYTRITGLKPEEILGKPATIDISEGESMHLKVLQTKK
PIRGVNMRLGPNKREVIVNVAPVVVNDSLKGSVGVIHDMTEMRSLTKELDQARTIIRKLE
SKYTFEDIIGDSEEMRISIEQAKLAAKTPVTVFLRGESGTGKELFAHAIHSASDRIYNKF
IRVNCAAIAEHLLESELFGYEEGAFTGAKRGGKRGLFEEADNGSIFLDEIGEMSLNTQAK
LLRIFQEGEIVRVGGTKPISINVRIIAATNVNMEKALSEGTFREDLYYRLNRMPIHIPPL
RQRKEDIPPLVDRLLVKLNQEYGRNIHKVTSNALMLLIGQDWPGNVRELENVLSRAMIFM
QSNETILDERHLPKTLFHSVHQESYVEKSFYEGTLAEQLEQTEKQILQQVLNDSQNNKMQ
AAKKLGISIRSLYYKLEKYNLA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacatactaattataggtgcaggtgctggaggcacagctatattacaactatta
tccaaatctgagcaacttagcactgtagcgattgtagatatacgtgaggatgcacctggg
gtagtgttagctagagaagctggcattgatacggagcaggattggcgagttgttttaaca
gatgaaattgatatggtggtagatgtcactggagaacctgcagtatttgaagaactgttg
caggcattgcctaaacgtacagtacttatcccaggaacaattgcttacttaattgttcaa
ttgttgaatgaaaaagattattacataaataaaacccaacatgcggcatataaacagcaa
attatctttaattcaatcgaagaaggcatgattggcatcgacccacaaggtcaaattatc
ttctttaatagaagtgctgcacgaatgaccgatgttactgtcaaagaagcgataggtaaa
catataaatgatattatcataaatagtgcactgccaagagtgtttgaatcgggtatagca
gaaatcaatcaagagctgaaattgtccaatgataagaaaattgtcacgtctcgatttccg
atgattgatggtagtgggaatcgtattggtgcatttgctgtatttaaagatatatcagag
gtcgtcaatttagcagaagaaataacaaatctaaaagaaattcaaatgatgttagaggcg
atcattcaatcaagcgatgatgccatttctgtagtagatgagaaaggtagagggatactc
gtcaaccctgcatatacaagaattactggcttaaaaccagaagaaattttagggaaacct
gctacgattgatatttctgaaggtgagagtatgcatttaaaagttttacaaacaaaaaaa
cctattcgtggtgtgaatatgcgactaggacctaacaaacgagaagtcattgtgaatgta
gcgccagttgttgtgaatgatagcttaaaagggagtgtaggcgttatacatgatatgaca
gaaatgcggtccttgacgaaagaattggatcaagcgcgaacgattatacgaaagcttgaa
tctaaatatacatttgaagatattattggcgattctgaagaaatgcgcatttccattgaa
caagcgaaattagctgcaaaaacaccagttacagtatttttgcgcggggagtcagggaca
ggcaaagaactgtttgctcatgctatacattctgcaagtgatcgtatatacaataagttt
atcagggtaaactgtgcggcgattgctgagcatttactagaaagtgaactatttggttat
gaagaaggggcctttacgggagcaaaacgaggtggaaaacgcgggttatttgaagaagct
gataatggaagtatttttcttgatgaaattggagaaatgtctttaaatactcaggccaaa
ctattacggatttttcaagagggcgaaattgtcagagttggtggaacaaagccgatttca
attaatgtacgaattatagcagctacgaatgtaaatatggaaaaagcattgtcagaaggt
actttccgagaggatttatattatcgattaaatcgaatgcccattcatataccaccgtta
cgtcaacgaaaagaagatataccgcctttagtagatcgtcttcttgttaagttgaatcag
gaatacggacgtaatattcataaagtaacttctaacgcattaatgctattaataggacag
gattggccggggaatgtgagagagcttgaaaacgtcttaagcagggcaatgattttcatg
caatcaaatgaaactattttagatgaaagacatctaccaaaaacacttttccattccgta
catcaagaaagttacgttgaaaagtccttttatgaaggaacacttgcggaacaactcgaa
caaacggagaaacaaatattgcaacaagtattaaatgatagccaaaataacaaaatgcaa
gctgcgaaaaaattagggatatcaattcgtagtttgtattataaattagaaaaatataat
cttgcataa
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