Viridibacillus sp. JNUCC-6: JNUCC6_09645
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Entry
JNUCC6_09645 CDS
T06874
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij03030
DNA replication
vij03410
Base excision repair
vij03420
Nucleotide excision repair
vij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNUCC6_09645 (polA)
03410 Base excision repair
JNUCC6_09645 (polA)
03420 Nucleotide excision repair
JNUCC6_09645 (polA)
03440 Homologous recombination
JNUCC6_09645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vij03032
]
JNUCC6_09645 (polA)
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_09645 (polA)
Enzymes [BR:
vij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNUCC6_09645 (polA)
DNA replication proteins [BR:
vij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JNUCC6_09645 (polA)
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JNUCC6_09645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC6_09645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QOV12988
UniProt:
A0A7M2QYS1
LinkDB
All DBs
Position
complement(1950473..1953100)
Genome browser
AA seq
875 aa
AA seq
DB search
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQKILEEEKPTKMLVAFD
AGKTTFRHSTYGEYKGGRQKTPPELSEQFPYLRKLLDAYRIKQYELEMYEADDIIGTLSK
KAEEQKLQVIVVSGDKDLTQLASDNTTVYITRKGMTDIEKYTPDHIQEKYGLTPEQIIDM
KGLMGDASDNIPGVPGVGEKTAIKLLKQYPTIEELYENVEQVSGAKLKEKLTTNEEQAKM
SKQLATIDCQSPITITLDDLVYDGPNVDELFSLWQDLSFKSLIEKSEFQSEATTTKELTF
SILEDVSAEQLQDAMAVHIELADEHYHTCDRFGIALVDDKQAYYIPYDKAMASVLLKEWL
EDASKKKYMVDSKAAQAALLRDGIKLAGVEFDMLLAAYIVNPAIPSDDVATISREFGYTD
VLSNDNVYGKGAKKATPAIESVAEHACRKANAVFILQPKLEQLLRENEQFELYKQLELPL
ASILSEMESEGITVDRERLVEMGHDLTTKLKTIEEDIYSIAGQAFNINSPKQLGVILFEK
LGLPVIKKTKTGYSTAADVLEKLEPEHEIIRHILQYRQLGKLQSTYIEGLLKEIHEEDQK
IHTRFQQALTSTGRLSSTDPNLQNIPVRLEEGRKIRQAFVPSNPEWLLFAADYSQIELRV
LAHMCGDENLINAFQNGSDIHTNTAMNVFHVAEEEVTSDMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAADFIERYFASFPGVQDYMKTIVEEAKKKGYVTTILNRRRYLPDLKSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMAMALKEQNLQTKMLLQVHDELIFEAPKEEI
PILEKLVPEVMGKAFELNVPLRADFAFGPTWYDTK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaagctactacttttagatggcaatagcttagcttatcgagcatttttt
gcattaccattattaacaaatgatagcggtattcacacaaatgccgtttatggctttact
acgatgttacagaaaatattagaagaggagaaaccaacgaaaatgcttgttgcatttgat
gctggtaaaacgacgttccgtcattctacatacggagaatataaaggtgggcgtcagaaa
acaccacctgaattatcagagcaattcccgtatttacgtaaattattagatgcgtatcgt
attaaacaatatgaactggaaatgtacgaagcagatgatattatcggcactctaagtaaa
aaagctgaagaacaaaagctacaagtaatcgttgttagtggagataaagacttaacgcag
cttgcatcagataatacaactgtctatattacgcgtaaaggtatgacggatattgaaaaa
tatacaccggatcatattcaagaaaaatatggcttaacgccagagcaaattatcgatatg
aaaggtctaatgggtgatgcatcagataatatacctggtgtacctggtgtcggtgaaaaa
acagccatcaaattattaaaacaatatccaacaatcgaagaactatatgaaaatgtagaa
caagtaagtggagcaaagttaaaagaaaaacttacgaccaatgaagagcaagcgaaaatg
agcaaacagttagcgacgattgattgtcaatcacctattactattacacttgatgactta
gtgtacgatggtccaaatgtagatgagttgttttctttatggcaagatttatcatttaaa
tcattaattgaaaaaagtgaatttcaatcagaagcaacaacaacaaaggaactaactttc
tctatattagaagatgtatcagcagagcagttacaagatgcgatggctgtacatattgaa
cttgctgatgagcactatcatacttgcgacagatttggtattgcattagtggatgataag
caagcatattatattccttacgacaaagcaatggcatcagtattattaaaagagtggtta
gaagatgcttcaaagaagaagtatatggtcgattcaaaagccgcacaagccgcattatta
cgtgatggtattaaattagcaggagtagaattcgatatgctcttagcggcatatattgtg
aatcctgctataccttctgatgatgttgcaacgatttcaagagaatttggttatactgat
gtattatccaatgacaatgtatatggtaaaggtgcaaagaaagccactccggcaatagaa
tctgtggcggagcatgcttgtcgtaaagctaatgccgtattcattttgcagccgaaatta
gaacaacttcttcgagaaaatgaacaatttgagctgtataaacaattagagttaccactt
gcttccatattaagtgaaatggaaagcgaaggtatcacagtagatcgtgaacgacttgtt
gaaatggggcatgatctaacaacgaaactaaaaacaattgaagaagatatttattcaatt
gctggtcaagccttcaacataaattcaccgaaacaacttggggtaattttgttcgaaaaa
ttgggattacctgtgattaagaaaacaaagacaggttattcaacagcagcggatgtatta
gaaaaactagagccagaacatgaaattattcgtcatattttacagtaccgtcagcttgga
aagttgcaatcaacctatattgaaggattattaaaagaaattcacgaagaagatcaaaaa
attcatacaagattccagcaagcattaacatcaactgggcgcttaagttctacagatccg
aatttgcaaaacattcctgtaagacttgaagagggtcgtaaaatccgccaagcatttgtt
ccttcaaatccagaatggcttctttttgcagccgattattcacaaattgagttacgtgta
ttggctcatatgtgtggtgatgaaaacttaatcaatgctttccaaaatggttcagatatt
catacaaatacagcgatgaatgtattccacgtagctgaagaggaagtaacgtcggatatg
cgtcgagcagcaaaagcagttaactttggaattgtttatggaattagtgattacggtcta
tctcaaaacttagatattacacgtaaagaagcagcggattttattgaacgttattttgct
agcttcccaggtgtacaagactatatgaaaactatcgtggaagaagcgaagaaaaaagga
tatgtgacaactattttaaatcgtcgtcgctatttgccagacctgaaaagttcaaacttc
aatttacgtagttttgctgagcgtacggctatgaatacgccaattcaaggtagtgcagcc
gatattattaaaaaagcaatgatagatatggcaatggcgttaaaagagcaaaatttacaa
acaaaaatgcttctccaagtgcacgatgagttaattttcgaagcaccaaaagaggaaatt
cctattcttgaaaaattagttccagaagtaatggggaaagcattcgaactcaatgtacca
cttagagccgattttgcatttggtccaacttggtatgatacaaaataa
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