Virgibacillus phasianinus: CFK37_05550
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Entry
CFK37_05550 CDS
T04951
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
vil
Virgibacillus phasianinus
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vil03021
]
CFK37_05550
Transcription machinery [BR:
vil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFK37_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
HTH_23
Lebercilin
GerE
Terminase_5
HTH_38
DUF273
Cobl
Motif
Other DBs
NCBI-ProteinID:
ASK61673
UniProt:
A0A220U1J8
LinkDB
All DBs
Position
complement(1082473..1083123)
Genome browser
AA seq
216 aa
AA seq
DB search
MNVKQLETENDNLNMLDDDTIIQSIHRGDSRALDYLIHKYKNFVRAKARTYFLIGADKED
IVQEGMIGLYKAIRDFDSDKLSSFKAFAELCITRQIITAVKTSTRQKHIPLNSYVSLDKP
VYDEESDRTLLDIIAGSRAIDPQELLINRERFADMETKLSELLSELEKKALHLYLDGRSY
QEISVELKRHVKSIDNALQRVKRKFEQLLESREITL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcaagcagctcgagacagaaaacgataacttaaacatgcttgatgacgatact
attattcagtcgattcatcgaggcgatagccgtgcgcttgattatctgattcacaaatat
aaaaattttgtgcgggccaaggcacgcacctattttttaattggggcggataaggaagat
attgtgcaagaaggcatgattggcctttataaagctattcgggattttgattcggacaag
ctgtcctcatttaaggcttttgctgaattgtgtattacgagacaaattattacagcagta
aaaacgtcaacacgacaaaaacacatcccgctcaattcgtatgtgtcgcttgataaacca
gtctatgatgaagaatctgatagaactctattagatattatagcgggatccagggcgata
gatccacaggaattactcataaatcgtgaaaggtttgccgacatggaaacgaaattgtcg
gaattattgagcgaattagagaaaaaggcgttgcacctctatttggatggacggtcctat
caggaaatatcagtagaattgaaacggcatgtgaagtctattgacaatgcccttcaacgt
gtaaaacggaagtttgaacagttactagagtcgcgggaaataaccctgtga
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