Virgibacillus phasianinus: CFK37_15495
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Entry
CFK37_15495 CDS
T04951
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFK37_15495 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vil03019
]
CFK37_15495 (rny)
Messenger RNA biogenesis [BR:
vil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFK37_15495 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Endotoxin_N
KH_2
PilX_N
Motif
Other DBs
NCBI-ProteinID:
ASK63459
UniProt:
A0A220U5Q9
LinkDB
All DBs
Position
complement(3203237..3204799)
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AA seq
520 aa
AA seq
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MDIITLIISILLTLIVGIVVGYLIRKSIAEAKISSAEKLAKQIVDEAHRNADASKKEALL
EAKDENHKLRQQTEQDLRERRNEAQKQETRLMQKEENLDRKSETLDNRELLLEKKENSLT
EKQQQIEEMESKVEAMIQKQQTELERISGYTTDQAKQIILDRIEQEVTHESALMIKEAEN
RAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKARREVDEYIR
EIGEETTFEIGVHGLHPDLVKILGRLKYRTSYGQNVLKHSTEVAYLSGLLAAELGEDVKL
ARRAGLLHDIGKAIDHEVEGSHVEIGKELGIKYKEHEVVINAIASHHGDEEATSVISVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESFTGVEKSFAIQAGREIRIIVKPDEIN
DLESVRIARDIRKRIENELDYPGHIKVTVIRETRTVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttggacattattacactaatcatctccattttgcttaccctaatcgtcggtattgttgtt
ggttatctgattcgtaaatctatagctgaagctaaaatttccagtgcagaaaagttagca
aagcagatagttgatgaagcacatcgaaatgcagatgcttcgaaaaaagaagcacttctt
gaggcgaaagatgaaaatcataaacttcgccagcaaacagaacaagatttgcgtgagaga
cgaaacgaagcgcaaaagcaagaaacgcgtcttatgcaaaaagaagaaaatctggacaga
aaaagtgaaacgcttgataatcgtgagctcttgttagagaagaaagaaaattcactaaca
gaaaaacaacaacaaattgaagaaatggaaagcaaagtggaagctatgatacaaaagcag
caaacggagcttgaacgcatttcaggatatacaactgaccaggctaaacagattatctta
gatcgtattgaacaagaagttacacacgaatcggcattaatgataaaagaggctgaaaat
cgtgcaaaagaagaagctgataaaaaagcgaaaagtattctatctttggcgttacagcgt
tgtgcagcagatcatgtagcagaaactactgtatctgtggttaaccttcctaatgatgaa
atgaaagggcggataattggacgtgaaggtcgtaatatacggacattagaaaccttaact
ggtatcgatttaattattgatgatacaccagaagcagtaattttatctggttttgatcca
attcggagagaaaccgctcgtatggcattagagaagcttgtacaggacggtcgcattcat
ccagctcgaattgaggaaatggttgataaggctcgtcgtgaagttgatgaatatatacgg
gaaatcggtgaagaaacaacgttcgaaattggagtacatggcctacatccagatcttgtt
aaaatacttggtcgtctaaaatatcgtactagctatggacaaaatgtattaaagcattct
acagaagttgcttatttatctggattgcttgctgcagaattaggtgaagatgtaaaactt
gcgcgtagggcgggacttctgcatgacattggtaaagcaatcgatcatgaggtagaagga
agccacgtagaaattggaaaggaacttggcattaagtacaaggaacatgaagttgtaatt
aatgcgatagcttcccatcatggtgacgaagaagctacttctgttatttcggttttagtg
gcagcagctgatgcattgtcagcagcgcgtccaggcgcaagaagtgaaacactagagaat
tatattaaacgattagaaaaactagaagaaatttcggaatcatttacaggtgttgagaaa
tcatttgcaatccaggctggacgggagattcgcatcattgttaaaccggatgaaattaat
gatctggaatcagtccgtattgcaagggatattcgaaaacgtatagagaatgaacttgac
tatcctggacacattaaagtaactgttataagagaaactagaacagttgagtatgcgaaa
taa
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