Virgibacillus sp. SK37: X953_00600
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Entry
X953_00600 CDS
T03219
Name
(GenBank) RNA polymerase sigma70 factor
KO
K27000
RNA polymerase sigma-H factor
Organism
vir
Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vir03021
]
X953_00600
Transcription machinery [BR:
vir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X953_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
Lebercilin
Tfb5
Sigma70_r4
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AIF42032
UniProt:
A0A075JL20
LinkDB
All DBs
Position
118630..119277
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AA seq
215 aa
AA seq
DB search
MNVDQLDIDDSKLGVLDDNEVIALVQQGNSRALDFLINKYKNFVRAKARTYFLIGADRED
IIQEGMIGLYKAIRDYDGEKLSSFKGFAELCVTRQIITAIKTATRQKHLPLNSYVSLDKP
IYDEESDRTLLDVIAGSKAIDPQELLVNREKFGDLETKLSELLSELEKQVLHLYLDGRTY
QEISVELKRHVKSIDNALQRVKRKLEQLMEASKNS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtcgatcagctggacatagacgatagcaaattaggtgtactggatgataatgag
gtaatcgctttagtgcaacagggtaacagtcgtgccctggattttcttataaataaatat
aaaaacttcgttcgtgcaaaagcgcgaacgtactttctcattggtgcagatagagaggat
attattcaagagggaatgatcggtctttataaagcgatacgtgattatgatggagagaaa
ttatcgtcctttaaaggttttgcagagctttgtgtcaccagacagattataacagcaata
aaaacagcgactcgtcaaaaacatctcccgcttaattcctatgtatctttggacaagcca
atatatgacgaagaatctgatcgaacgcttctggatgtaatagcgggatcaaaagcaatt
gacccacaggaattactagtgaacagagagaagtttggagatttagaaacgaaattatct
gaattattaagcgagttggaaaaacaggtgctgcatttatatttggatggccgaacctat
caggaaatatcagtagaattgaagcggcatgtaaaatcaatagataatgcacttcaacgt
gtcaagcgtaagttggaacaattgatggaagctagtaaaaactcttaa
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