Virgibacillus sp. SK37: X953_14010
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Entry
X953_14010 CDS
T03219
Gene name
uvrA
Definition
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
vir
Virgibacillus sp. SK37
Pathway
vir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X953_14010 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vir03400
]
X953_14010 (uvrA)
DNA repair and recombination proteins [BR:
vir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X953_14010 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X953_14010 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
AAA_21
AAA_33
AAA_14
AAA_22
AAA_23
BCA_ABC_TP_C
AAA_18
DnaJ_CXXCXGXG
APS_kinase
ATPase
ATPase_2
cobW
Viral_helicase1
NACHT
DUF2075
AAA_25
Septin
AAA_24
NB-ARC
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AIF44140
UniProt:
A0A075JRD0
LinkDB
All DBs
Position
complement(2596425..2599301)
Genome map
AA seq
958 aa
AA seq
DB search
MPSKSIQIQGARAHNLKDIDVTIPKNNLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGHP
TCPKHGIEISSQTVQQMVDRILEYPERTKLQILAPVVSGRKGEHVKVFEKLRQEGYVRIR
VDKEMREVSEEIKLEKNKKHSIEVVVDRIVVKDGITGRLSDSIETALALGEGKIIVDVIG
EEELMFSENHACPICGFSIDDLEPRLFSFNSPFGACPTCDGLGTNLEVDLDLVIPDWDKT
LNEHAIAPWEPISSQYYPQLLQSVCIHFNINMDTPVKDLPKEQMDKILYGGGNEKVHFHY
VNDFGKVRDNHVAFEGVLANVARRYRETSSDFIRETLEKYMAQKHCPACKGYRLKEEALA
VLVNGLHISKVTDFSIVEAQNFFEQLELSEKEEKIAQMILKEICNRLEFLNNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIETLKRMRDLDNT
LIVVEHDEDTMLAADWLIDIGPGAGEHGGQIVSSGTPSEVMKDERSLTGQYLSGDKFIQL
PSQRRKSDKRFIEVVRAEENNLKKVNAKFPIGLMTVVTGVSGSGKSTLVNEILYKSLAKE
LYRGKHKAGKHKTVKGIEHIEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKG
KNISDVLGLTIEESLEFFANIPKIKRKLQTIYDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHRRSNGKSFYILDEPTTGLHVDDIKRLLAVLQRLVDNGDTVLIIEHNLDVIKTADHII
DLGPEGGARGGQIIATGTPEEIAKKEVSYTGRYLKPVLERDQQRMNKLISNKEKISTK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtaaaagcatacaaattcaaggcgcaagggcacataatttaaaagatattgat
gtcaccatacctaaaaataacctagtcgtacttacaggtttgtctggatcgggaaaatct
tcactcgcttttgatacaatttatgcagaagggcagcggcgctatgtcgagtctctttct
gcttatgcacgacaatttttgggacagatggataagccggatgtagatgctatagaggga
ctgtcccctgctatttctattgaccagaagactacgagtaagaatccaaggtctacagta
ggaacagtgacagaaatctatgattatttaagacttctatatgccagggtgggacatccc
acttgtccaaaacatggaattgaaatttcctcccaaacggtccagcaaatggttgatcgc
attttggaatatcctgaacgcacgaagcttcaaatacttgcgcctgtcgtttccggcaga
aaaggtgagcatgtaaaagtgtttgagaaattgcgtcaggaaggttatgtaagaataaga
gttgacaaggaaatgcgagaagtatcggaagaaattaaattagagaaaaacaaaaagcat
tctattgaagttgtggtagaccgtattgtagttaaagatggaattactggccgtttgagt
gattctattgaaactgcacttgctttgggcgaaggcaagatcattgttgacgtaataggt
gaagaagaattaatgtttagtgaaaatcatgcatgtccaatatgtggattctctattgat
gacttggaaccaagattattttctttcaatagtccatttggagcatgcccgacatgtgac
ggacttgggacgaacctggaagtagacttggatctggttattcctgattgggataagacg
ttaaacgagcatgcgattgccccttgggagccaattagttcacagtactatcctcagttg
ttacaaagtgtttgcattcattttaatattaatatggatacaccagtaaaagaccttcca
aaagaacaaatggataaaattttatatggaggcggaaatgaaaaagtccattttcattac
gtaaatgattttggcaaagtcagagataaccatgtggcttttgaaggggtattagcaaat
gtagccagacggtatcgggaaacttcatctgacttcattcgtgaaaccttagaaaagtac
atggcccagaaacattgtcctgcatgtaagggataccgtttaaaagaagaagctttagca
gttctggtaaatggtcttcatataagcaaagtcactgatttttccatcgtagaggctcag
aacttttttgaacaattagagctaagtgagaaggaagaaaaaattgctcaaatgatcctc
aaggaaatttgtaaccgactggaatttttaaataatgtcggattggattatcttacttta
tcccgtgcagctggtacactctcgggcggggaagcccagcgtatacgcctggctactcag
attgggtctgcattgacaggggtcctttacgtattggatgagccatccatcggactccat
caacgggataatgatcgccttattgaaacattaaaacgtatgagggatttggataatacc
ttaattgttgtggagcacgatgaagataccatgctggcagccgattggttaattgatatt
gggccaggagctggggagcatggtggtcaaatagtttcaagtggcacgccatcagaggta
atgaaagatgagcgttctctaacaggtcaatatttatctggagataaatttattcaacta
ccatctcaaagaagaaaaagcgacaaacgttttattgaagtagttagagcggaagagaat
aatttaaaaaaggttaatgctaagtttccaattggtttaatgacggtagttaccggggtt
tctggttcaggtaaaagtactttagtaaatgaaatcttatataaatcactagccaaggaa
ttgtatcgtggtaaacataaggcaggaaagcataaaacggtaaaagggattgagcatatc
gagaaggttatcgatattgaccaatcaccgattgggcgtacacctcgttccaacccagca
acttatactggtgtttttgatgatattcgtgatgtatttgctcaaactaacgaagcaaag
gtacgaggctacaaaaaaggtcgtttcagttttaatgttaaaggtggaagatgtgaagct
tgtcgtggcgatggcattattaaaattgaaatgcacttcttgccagatgtatatgttcct
tgtgaggtttgtcatgggaaacgatacaatcgggaaaccttggaggttaaatataaagga
aagaatatctcagatgtattagggcttaccattgaagagtccttggagtttttcgctaac
atccctaaaattaaacgtaaattgcaaactatttatgatgtaggtttaggatatatcaaa
ctaggacaaccagcaactacattgtcgggcggagaggcgcaacgggtgaagcttgctagt
gaattacaccgccgttccaatggaaaatctttttatattttagacgaaccaaccactggt
ttacatgttgatgatatcaagcgtttgttagctgtgcttcagcgtctagtagataatgga
gataccgtactaattattgaacacaatcttgatgtgatcaaaactgcagatcatatcatt
gacttaggaccagaaggcggagcacgtggaggacagattattgcaacaggcacgccagaa
gagattgcaaaaaaagaagtttcttatactgggcggtatttaaaaccagttttagaacga
gatcagcagcgaatgaacaagctgatttcaaacaaagaaaaaataagtacaaaataa
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integrated database retrieval system
