KEGG   Vibrio japonicus: NP165_19515
Entry
NP165_19515       CDS       T08510                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vjp  Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:vjp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vjp02044]
    NP165_19515 (tssC)
Secretion system [BR:vjp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NP165_19515 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UUM32461
LinkDB
Position
2:1347927..1349402
AA seq 491 aa
MSVEAQVPEQEATLVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFISELLSSSKTEKV
DQSLVDLMISEIDQKLSKQVDAILHHEEVQSIESTWRGLKYLVDHTEFRENIQIELISAK
KDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVICDYQLSASSPDIKLMEYMGN
VGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYAKWRGFREHEDARYVGLCT
SRFMLRTPYSVEDNPIKAFDYDEKVTDSHDNYLWGNSAYALASKISESFAKYRWCPNIIG
PQSGGAVGDLPVYNFEAMGQIETKIPTEILVSDRREFELAEEGFIALTMRKGSDNAAFFS
ANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERSDLE
IELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSNVEGDPGWYKVSLSVRPHFKYMGAS
FDLSLVGKLDQ
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctgtagaagcacaagtgccagaacaagaagcaaccttagtagaatcaggttcactt
ctggatagcattcttaatgaaacacgtttaaagccaagtgatgaaggttttgatgtcgca
aaacgtggtgttgaagcgtttattagtgagctactaagcagttcaaaaacagagaaagtt
gatcaatctcttgttgatctaatgatttctgaaatcgaccagaagctgtctaaacaagtt
gatgccattcttcaccacgaagaagtccaatcgatagaatcgacgtggcgcggtcttaaa
tacttagtcgaccacactgagttcagagaaaacattcaaattgaactgatttcggcgaag
aaagatgaagttcttgatgattttgaagatgctcctgaagtggtaaagtctggcctttat
aaacagatttacactcgcgaatatggccagtttggtggtaagcctgtgggtgcggtaatc
tgtgattaccaattgtctgcatcgtcaccagacatcaaactgatggaatacatgggcaat
gtgggggcaatgtctcacgcgccgttcattacgtctgcgtctgctaagttctttggttta
gatagttatgaagagttacctaacctaaaagatcttaaatcagtatttgaggggccacag
tacgcgaaatggcgtggtttccgtgagcacgaagatgcgcgttacgttggtttatgtacg
tctcgttttatgctgcgcacaccatactctgttgaagataatccgatcaaagcgtttgat
tacgatgaaaaagtgacagatagccacgacaattatttgtggggtaactctgcttatgcg
cttgcgtcaaaaatcagtgagtcatttgcgaagtaccgttggtgtccgaacattattggc
ccacaaagtggtggcgcggtaggcgatctacctgtctacaactttgaagcaatgggacaa
atcgagacgaagataccgacagaaatcctggtatcagaccgtcgagaatttgaactagcg
gaagagggttttatcgcattaacaatgcgtaaaggttccgacaatgctgcgtttttctca
gctaactcagttcaaaaaccaaaagtattcgcgaatactcctgaaggtaagcaagcggaa
atgaactacaaactaggtactcagctaccttacatgttcatcattaaccgtcttgcgcat
tacatcaaagtattgcaacgtgagcaaatcggctcgtggaaagagcgttctgacctagaa
attgagttgaataaatggattcgccaatacgtttctgaccaagaaaacccaccagcagaa
gtgcgtggtcgtcgaccactacgtgctgctaaggtagaagtatcgaacgtcgaaggtgat
ccaggttggtataaagtatctttgtctgtccgtcctcactttaagtacatgggggccagc
ttcgatctgtcactagttggtaaacttgaccaataa

DBGET integrated database retrieval system