Vulpes lagopus (Arctic fox): 121498247
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Entry
121498247 CDS
T07435
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vlg01002
]
121498247 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121498247 (USP40)
Enzymes [BR:
vlg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121498247 (USP40)
Peptidases and inhibitors [BR:
vlg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121498247 (USP40)
Ubiquitin system [BR:
vlg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121498247 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121498247
NCBI-ProteinID:
XP_041624289
LinkDB
All DBs
Position
8:6358383..6438065
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AA seq
1334 aa
AA seq
DB search
MFVSNVGLGRLVGLGWRQALLSFTMFGDLFEEDYSTVSDYQYGREKKLKTKGLEPPAPRE
FTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSFEDKDKPDAKVRIIPLQ
LQRLFAQLLLLDQDAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHD
LINRLYHGTVVNQVVCKECKNVSEKQEDFLDLTVAVKNVSSLEDALWNMYVEEEVFDCDN
LYHCGTCDKLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKRERYKETSCYTFPLRINFKPF
CEQSDTDDLEYVYELFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEEKSKPGMNLKDLQ
NEEEIDDDPLIILKAILLQEESNLIPVDQLGQKLLKKIGMSWNKKYRKQYGPLRKFLQLH
PQIFLLSPDESTVSLLKNGSLQAESHFPRSDQHIFKTLTSESPGLNDGTSCPHWFDINDS
KVQPIKEKDIERQFQGKESAYMLFYRKSQLQRPPEARANPRYGVPCHLLNEMDAANIELQ
TKRAECDSIDNNFDLHLHLGPHYHFLNGALHPVVSQAESTWDLTFDKRKTLGDLRQSIFQ
LLEFWEGDMVLSVAKLVPAGLHVYQMLDGDDLTLCELEIADGEDLFVWNGVEVGGIQIPT
GSDCEPLLLNVLHLATSSEGEKCQQLVESPHVFPSNAEVGAVLTALAAPVGVLFINTTDP
AGEENWVAIPKEDLKKTFREQGLRNRSSVLVQDSSDDNSLLLKQGKWFTGMNEVNWLQVQ
NLCELGSEEKQVKISATVNTVVFDIRIKAIKELKLMKELAENSCLRPIDRNGKLLCPVPD
SYTLKEAELKMGSSLGLCPGKAPTSSQLFLFFTVGSDVQPGTEMEIIVEETMSVRDCLQL
MLGKSGLPGDRWHLRKMDWCYEAGEPLCEEDATLRELMICSGDTLLLIEGKLPPPGFLKV
PLWWYQPGGSPGHWKNHQDQRNGAPSPGGVWRAATTQGAPGDLHGEVSLCYLGDLEISEE
ATVAELKSQVRLLRVAHGSGGLASSSEILIPSSVSFSLTYSLFRYGMCYMPCSAAMTLSS
SSGFVIPSPAFLRAWTVERKRLGRLLRINRQQLRDYKLGRKTEICLEPLQEEENLGPQDV
VLRTRMRLPGERAYAPCVDLVWDTARGWTAGSLRQRVAHFCSLPVEKIEIAKYFPEKFEW
LPISSWNQQFTKRKKKKKQDNLQGAPYYLKDGDTIGIKNVLLEDDGDFGTDADDLGRGTP
RRPSRYGAAGLPRKRAGPPIGAPGAGPARAASLPPPPLAGSQTVVTPAGDPPPSPPASCP
YHNHNLLEHSTSTS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttcgaacgtggggttgggccggctcgtggggctgggctggaggcaggcactg
cttagtttcacaatgtttggggatctgtttgaagaagattattccactgtgtcagattat
cagtatggaagggagaagaaattaaagaccaaagggttggagccaccggctcctagagaa
ttcaccaatttaagcggaattaggaatcagggtggaacctgttaccttaattcccttctt
cagactcttcatttcacacctgaattcagagaagctttattttcccttggcccagaagag
cttggttcattcgaggataaggataaacctgatgcaaaggttcggatcatacctttacag
ttacaacggttgtttgcccaacttctgctcttagaccaggatgcagcatccacagccgac
ctcacagacagcttcggctggaccagcaatgaggaaatgaggcaacatgatgtgcaggaa
ctgaatcgaattctctttagtgctttggaaacctctttagtcgggacctccggccatgac
ctcatcaatcgtctgtatcatggaaccgttgttaaccaggttgtttgtaaagagtgtaag
aatgtcagtgaaaagcaggaagacttcctagatctaaccgtagcagtcaaaaatgtgtca
agtttggaagatgccctctggaacatgtatgtagaagaggaagtttttgactgtgacaac
ttataccactgtgggacttgtgacaagctggttaaagctgcaaagtcggccaaattacgt
aagctgcctccctttcttactgtttcattattaagatttaatttcgattttgtgaagcgt
gaacgatacaaggaaactagctgttacacattccctctccggatcaatttcaagcctttc
tgtgaacagagtgacacggatgacttggagtatgtatatgagctcttctcagtcataata
cacaaaggtggctgctacggaggacattaccacgtgtatattaaagatgtcgatcatctg
ggaaactggcaatttcaagaggaaaaaagcaaaccaggtatgaatttaaaagatctccag
aatgaagaagagattgatgatgatcccttgataattctaaaagcaatcttactacaggag
gagagtaatctaattcctgttgatcagctgggccagaaactcttgaaaaagataggaatg
tcttggaacaagaagtacagaaaacagtatggaccactgagaaagttcttacagcttcat
ccccagatatttctactcagtccagatgaaagtacagttagtctattgaagaacggttct
ctccaggctgagtctcatttcccaaggagtgatcaacacattttcaagacactaacttca
gaatccccaggactaaatgatggaacctcctgtccccactggtttgatataaatgattcc
aaagtccaaccaatcaaggaaaaggatattgaacggcagtttcagggtaaagaaagtgcc
tacatgttgttttatcggaaatctcagttgcagagaccccctgaagctcgagctaatcca
agatacggggttccgtgtcatttgctgaatgaaatggacgcagccaacattgaactgcaa
acaaaaagggcagaatgtgattctatagacaataattttgacttgcatctccacctgggc
cctcattatcatttcctcaatggggctctacacccagtcgtctctcaagcagaaagcaca
tgggatttaacctttgataaaagaaaaactttaggagatcttcgacaatcaatatttcag
ctgttagaattttgggaaggagatatggttcttagtgtggcaaaacttgtaccagcagga
cttcacgtttaccagatgcttgatggagatgacctgacgctgtgtgaactggagattgca
gacggggaagacctctttgtgtggaatggggtggaggttggtggcatccagattccaact
ggtagtgactgtgaacctctgctcttaaatgttcttcatctagcaacaagcagcgagggg
gaaaagtgtcagcagttggtagagtcaccacatgtctttccatccaatgcggaagtgggc
gctgtgctcacagctctggcggcccccgtgggtgtcctcttcatcaacaccactgaccct
gccggggaagagaactgggttgccattcccaaggaggacctgaagaagacgttcagagag
cagggcctcagaaaccggagctcggttcttgtgcaggattctagtgatgataacagtctg
ttgctcaaacaagggaaatggttcactggtatgaatgaggtcaactggctccaagttcaa
aatttatgcgaattaggatccgaagagaagcaagttaaaatatcagcaactgtgaacaca
gtggtgtttgatattcgaattaaagccataaaggaattaaaattaatgaaggaactagct
gagaacagctgtttgaggcctattgatagaaatgggaagctgctttgtccagtgccagac
agttacaccttgaaggaagcagaactgaagatggggagttcactgggactatgtcctggg
aaagcaccaacttcctcccagctgttcctgtttttcactgtggggagtgatgttcagccc
ggtacagagatggagatcatagtagaagaaacgatgtctgtgagagattgtttacagctc
atgctggggaagtctggcctgccgggagacaggtggcatttacgaaaaatggattggtgt
tatgaagctggagagcctttatgtgaagaggatgcaaccctgagagaacttatgatatgt
tctggagatactttacttttaattgaaggaaaacttcctcctccgggtttcctgaaggtg
cccctctggtggtaccagcctgggggttccccgggtcactggaagaatcatcaggaccag
aggaacggtgccccttctccaggtggggtctggagagctgctaccacccaaggcgctcct
ggtgacctgcacggggaggtgtccctctgctacttgggggaccttgagatctcagaagag
gccaccgtggcagagctgaagtcccaggtcagacttcttcgtgtggcgcatggtagtggt
ggcctggcttcttccagtgagatattaataccctcttctgtttccttttccctcacttac
agtctgttccgatatggcatgtgttatatgccatgttcggcggccatgaccttgtcctcc
tcctcggggtttgtcatcccgtccccagccttcctcagagcctggaccgtggagaggaag
cgcctgggcaggcttttacgaatcaaccggcagcagctcagggactacaaactgggacgg
aaaactgagatctgcttagagccccttcaggaagaagaaaacttgggccctcaggacgtg
gtactgaggacacggatgcgcctcccgggcgagagggcgtatgcgccatgcgtggacttg
gtgtgggacaccgcccgaggctggactgctggctccctgagacaacgagttgcccacttc
tgctctcttcccgtggagaaaattgaaattgccaagtacttccccgaaaagtttgagtgg
cttccaatatctagctggaaccagcaatttaccaagaggaaaaagaagaaaaagcaagat
aatttgcagggggcgccttattacttgaaagatggagacactattggtattaagaatgtc
ctgctggaggacgacggggacttcggtaccgacgcggacgacctggggagagggacgccg
aggcggccgagcaggtatggtgcggccgggctgccccgcaagcgcgctgggccccctatc
ggggctccgggggcagggcctgcccgggccgcctccctgccccctccgcccctcgctggg
tctcagaccgtggtcaccccagcaggtgaccccccaccttcccctcctgcctcctgcccc
taccacaaccacaatctactggaacattccacctccacgagctag
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