KEGG   Vibrio mimicus: AL543_07400
Entry
AL543_07400       CDS       T04381                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vmi  Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vmi03009]
    AL543_07400
   03016 Transfer RNA biogenesis [BR:vmi03016]
    AL543_07400
Enzymes [BR:vmi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     AL543_07400
    5.4.99.29  23S rRNA pseudouridine746 synthase
     AL543_07400
Ribosome biogenesis [BR:vmi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AL543_07400
Transfer RNA biogenesis [BR:vmi03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    AL543_07400
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMG02876
UniProt: A0A1D8S8I3
LinkDB
Position
2:complement(302278..303015)
AA seq 245 aa
MAMTEYNPPKEPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVV
HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQDEGEVNLPLCCDWP
NRPKQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLY
APQEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDFYPEAEEQILQHFDPERKLPDYK
KLSQD
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcaatgaccgagtacaatccacccaaggaaccgtggattgatgtgatttatgaggat
gaacacatcatcgcagccaacaagccttctggtttgttatctgttcctgggcgacctgtt
gagcactacgacagtatgtgggctcgtttggtggattactgccctgatgtgaaggtcgta
caccgtttggatatgtcgacttctgggttgatcctgtttgctaaaggcaaacatatggaa
tcggcattgaagaagcagtttcagtatcgtctcactcataaaatctactatgcccgcgta
tggggtgtgatggagcaagacgaaggcgaagtgaatttgccgctgtgttgtgattggcca
aaccgcccgaaacagaaagtctgttttgaagaggggcgtgattctctgacgcgctatcaa
gtcgtaaagcgtgaagagaaaaccacagtcgtacgcctcatcccgatcactggacgctct
catcagttgcgtgtgcacatgcaatcgctcggccatccgattgtcggtgatgatctttac
gcgccacaagaagccgtcgagtttgccgatcgtctgcaactgcacgccgcggagctgtgt
ttctaccatccacgtagtcattggctacgcactttatttgtcccttgtgacttctatccc
gaagccgaggagcagattttgcagcatttcgatcctgagcgaaaattaccggactataaa
aagctatcccaagactaa

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