Vibrio mimicus: AL543_10765
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Entry
AL543_10765 CDS
T04381
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00730
Thiamine metabolism
vmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AL543_10765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vmi03009
]
AL543_10765
Enzymes [BR:
vmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
AL543_10765
Ribosome biogenesis [BR:
vmi03009
]
Prokaryotic type
GTPases
AL543_10765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
nSTAND1
GTP_EFTU
AAA_16
AAA_29
ABC_tran
AAA_22
AAA_15
RNA_helicase
AAA_23
Roc
Guanylate_kin
DUF815
Dynamin_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMG03468
LinkDB
All DBs
Position
2:complement(986371..987432)
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AA seq
353 aa
AA seq
DB search
MAKKKKLTQGQVRRVRNNQHKKLKQEESIVWDETLLGNAQPGLVITRFGQHADIEDPETG
EIHRCNLRRGIESLVSGDKVLWRPGAETLAGISGVVEAVETRSSVLVRPDYYDGLKPVAA
NVDQMVIVSSVLPELSLNIIDRYLIASETLGIAPLIVLNKIDLLSPELREQYTTWLNDYR
AIGYEVLYVSKKTGEGIADLEVKLRDRTNVFIGQSGVGKSSLVNALLPELEEHVEEGAIS
ETSGLGQHTTTAARLYHIPSGGDLIDSPGVREFGLWHLETDDVTKAFVEFRPYLGGCKFR
DCKHREDPGCLLREAVEKGEISAQRFENYHRIVQSMTENKANRQYSRSKKADL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagaaaaagctcacgcaaggccaagtacgccgagttagaaacaaccaacac
aaaaaactcaagcaagaagagtctattgtttgggatgaaactttgcttggtaatgcccaa
cccgggctggtgattacccgctttggccaacatgccgatattgaagatccagaaacaggg
gaaatccatcgctgtaatctgcgccgtggcatagaaagcctcgtttctggtgacaaagtg
ctgtggcgcccaggagcagaaactctcgcgggaatctccggtgtggtagaagcagtagaa
acgcgcagttcagtattagtgcgcccagattattacgatggcctcaaacccgttgcggca
aacgtggatcaaatggtgatcgtgtcgtccgtgttacctgagctctctttgaatattatt
gatcgctacttgatcgcttccgaaaccttgggtattgcaccattaattgtgctgaacaag
attgacctgctcagcccagagcttcgagagcaatacaccacatggttaaatgattaccgc
gctattggctacgaagtgctgtatgtcagtaagaaaaccggcgaagggattgctgatctt
gaagtgaagctacgtgatcgcaccaatgtgtttatcggtcaatctggtgtaggaaagtca
agtctggtcaatgcgttacttcctgaattggaagagcatgttgaagaaggagcgatttct
gaaacgtcgggcttaggtcaacacaccacaacagccgctcggctttatcacattccgagt
ggcggtgatttgattgactctcccggagtgcgtgaatttggtttatggcatttagagact
gatgatgtcactaaagcttttgtggagtttcgcccttatttaggtggctgcaaattccgt
gattgcaaacatagggaagaccctggatgcttgctgcgtgaagcggttgaaaaaggcgaa
atcagcgctcagcgtttcgaaaattaccaccgtattgtacaaagcatgacggaaaacaag
gctaaccgacagtattcgcgcagtaaaaaagccgatctgtaa
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