Vibrio mimicus: AL543_20400
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Entry
AL543_20400 CDS
T04381
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vmi02000
]
AL543_20400
Transporters [BR:
vmi02000
]
Other transporters
Pores ion channels [TC:
1
]
AL543_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AMG05177
LinkDB
All DBs
Position
2:complement(3051726..3052709)
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AA seq
327 aa
AA seq
DB search
MKKLAAIISTTLLFASSAAMAEVYVGGKVGKSWLDDACLANQTCNDDDEVVGAFLGYQAN
KWLSVEAGYDYLGKFTAAGLADEKVQAVTLAPRLSLPLTEAIALYGKVGGAYVDYGSKSD
YSYLGAAGLEFNTNHNVTMRLEYQNITDINNDIVRANAETATLGIAYKFGGSEAPAAVEQ
RPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDKLVGYLNQYPQ
AKVEVVGHTDSNGSEAYNQKLSEKRAQAVAKALEAQGVDAARITAKGQGESNPIASNATA
EGREKNRRVELVIPEFQYQVTEYQVTE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctagcggcaatcatttcaacgacgttactttttgcttcttctgctgcaatg
gctgaagtatatgtcggaggtaaggttggtaagtcttggttggatgacgcatgcctggca
aatcagacatgtaacgatgatgatgaggtagttggcgcgtttctaggctaccaagctaac
aaatggctttctgtagaagcaggatacgattacttaggtaagtttactgctgcaggatta
gctgatgagaaggtacaggcagttaccctggcaccaagactcagccttcctctaacagaa
gcaattgcgctatacggtaaagtgggtggtgcttatgtcgattacggcagcaagagcgat
tactcatacctaggtgcagctggcttagagtttaacaccaaccacaacgtcaccatgcgt
ttggaataccaaaacatcacagacatcaacaacgacatcgtacgtgctaacgcagaaact
gccacgttaggtatcgcttataagtttggtggaagtgaagcaccagctgctgttgagcaa
cgtccagcagaaccagctccagtagcagaagagccagtagtagagaaagtggcagtaact
aaaacgttcactttccaacatctagacagcggcacatttgctaacaacagcgctgagtta
aagccatcaatggagacgaaactcgacaaattggtaggctacctaaaccaatacccacaa
gctaaagtggaagtggtaggtcatactgattcaaacggctctgaagcttacaaccagaaa
ctgtctgagaaacgtgctcaagcagtagcgaaagctctggaagctcaaggtgttgatgct
gctcgcatcacagcgaaaggccaaggcgaaagcaacccaatcgcttctaacgcaacagcg
gaaggtcgtgagaaaaaccgccgtgttgagctagttattcctgagttccagtaccaagtt
actgagtaccaagttactgagtaa
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