Vibrio natriegens: PN96_20960
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Entry
PN96_20960 CDS
T04636
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vna
Vibrio natriegens
Pathway
vna00260
Glycine, serine and threonine metabolism
vna00630
Glyoxylate and dicarboxylate metabolism
vna00785
Lipoic acid metabolism
vna01100
Metabolic pathways
vna01110
Biosynthesis of secondary metabolites
vna01200
Carbon metabolism
Module
vna_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PN96_20960
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PN96_20960
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PN96_20960
Enzymes [BR:
vna01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PN96_20960
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF6227
Motif
Other DBs
NCBI-ProteinID:
ALR18402
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All DBs
Position
2:1375714..1378578
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDQQKMLDAINVANLDALIEETVPAQIRLEKPLALAE
AKSEADMLVAMRKFADQNQIKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTLEVVKTRAKYIGFEVLVGSLESLPEQDVFGALVQYPGTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDVNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVFHGAEGLRTIAR
RTHHMTAILAAGLTKSGYELAHNSFFDTITINTDGKTEELYAKAQAADINLRKLNGKLGI
SFDETTTTDDINALFEVFGVQQDVNALSSEIATNEFAAIPEALRRTSKFLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPLEQAAG
YSALAKDLKEKLCEITGYDDFSLQPNSGASGEYAGLIAIQRYHDSRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEDGNIDMTDLAAKIEKHKDNLSSIMITYPSTHGVYEEHV
KEVCEMVHAAGGQVYLDGANMNAQVALTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGKELAVSAADMGSASILPISWAYIAMMGEAGLQEATKVAIL
NANYVMERLRPHYPILYRGKNGRVAHECIVDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELDRFCEAMIAIREEMTKVKNGEWPLENNPLVNAPHTQVDL
SAAEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIENYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaatgagttcgttgctcgccacaacggc
ccaaacaaatctgaccaacaaaaaatgttggatgcgatcaatgttgctaaccttgacgca
cttatcgaagaaacggttccagcacaaattcgcctagaaaagccactagcactagcagaa
gcgaaaagcgaagcggacatgctggttgcgatgcgcaaattcgctgaccaaaaccaaatt
aaacgtacgttcatcggtcaaggttactacaacaccttcacgccaaatgtcattctacgt
aacgtactagaaaacccaggctggtacacagcttacactccttaccaaccagagatctct
caaggtcgtctggaagcgcttcttaactaccaacaaatggtcatggacctaactggtatg
gaaatcgcgaacgcttctcttcttgacgaagcaacggcagcagctgaagcgatgacgcta
tgtaagcgtgcaggtaagagcaaaagtaacgtattcttcgtggctgacgatgttcaccca
caaactctagaagttgtaaaaactcgtgctaaatacattggctttgaagtactcgttggt
tcacttgaatcactaccagaacaagacgtatttggtgcgctagttcagtacccaggtaca
acaggtgaagtacgtgatttaacggacatcatcgcgaaagcacaagctaacaaaacatta
gtaacggttgctactgacctactcgcttctactttgctgaaaccagcaggtgaaatgggt
gcagacgtggttattggttcagctcagcgtttcggcgtacctatgggttacggcggtcca
cacgcagcattcatggcaactcgtgataagcataagcgtacaatgcctggtcgtgtaatc
ggtgtttctatcgatgtaaacggcaaccaagcactgcgtatggcgatgcaaacgcgtgaa
cagcacatccgccgtgaaaaagcgacatcaaacatctgtactgcgcaagcactactagcg
aacatggcatctttctacgcggtattccacggcgcagaaggtctacgcactatcgctcgt
cgcactcaccacatgactgcgattctggctgctggtctgactaagtctggctacgagctt
gctcacaatagcttctttgacaccatcacgatcaacacagatggcaaaactgaagagctt
tacgcgaaagcacaagcggcagacatcaacctgcgtaagctaaatggcaagctaggtatc
agcttcgacgaaacaacaactactgacgacatcaacgctctatttgaagtgtttggtgtt
caacaagatgttaacgctctgtcttctgaaatcgcaaccaacgagtttgctgctattcct
gaagcgctacgtcgtacgtctaagttcctgactcacccagtattcaacacgcaccacagc
gaaacgcaaatgatgcgttacctgaaacagctagagaacaaagacttctcactgactcac
ggtatgatcccgctgggcagctgtacgatgaaactaaacgcagcagcagagatgatccct
gttacttggcctgagtttggttctatccacccattcgctcctctagagcaagcggcaggt
tactctgcgctagcgaaagatcttaaagagaagctatgtgaaatcactggttacgatgat
ttctctctacagccaaactctggtgcatctggtgaatacgctggccttatcgcgattcaa
cgctatcacgacagccgtggcgaaggtcaccgtaacgtatgtttgatcccaagctcagca
cacggtactaacccagcgacagcgtcaatggtatcaatgaaagtcgttgtggtgaaatgt
gatgaagatggcaacatcgacatgactgacttagcagcgaaaattgagaaacacaaagac
aacctatcaagcatcatgatcacttacccttctacgcacggcgtatacgaagagcacgtg
aaagaagtatgtgaaatggttcatgcagcaggtggtcaggtttacctggacggcgctaac
atgaacgcacaggttgccctaacctctccaggtttcatcggctctgacgtttctcacttg
aacctacacaaaaccttctgtatccctcacggtggtggtggtccaggtatgggtcctatc
ggtgttaaatctcacctggcacctttcctaccaggtcacatcgagaacggtgttgaaggt
aaagagctagcggtttctgcagcagatatgggtagcgcatctatcctgcctatctcatgg
gcttacatcgcgatgatgggtgaagctggcctacaagaagcgactaaagttgcgattctt
aacgccaactacgtgatggagcgtctgcgtccacactacccaattctttaccgtggtaaa
aatggccgcgtagcgcacgaatgtatcgttgatattcgtccgcttaaagaagaaacaggc
atcagcgaagaagacatcgcgaagcgtctaatggactacggtttccacgcgccaacgatg
tcattcccagttgcaggtacactgatggttgaaccaactgaatcagaagatttggaagag
ctagaccgcttctgtgaggcaatgatcgcaatccgcgaagagatgacaaaagtgaaaaac
ggtgagtggccactagagaacaaccctctagttaacgctccacacactcaagttgatctt
tcagcagcagaatgggatcgcccttactctcgtgagctaggctgtttcccatcgaaagcg
actaagtcttggaaatactggccaacagtgaaccgcgtagataatgtttacggcgaccgt
aacctaatctgctcgtgcccaagcattgagaactacgaagactaa
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