Virgibacillus necropolis: CFK40_01050
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Entry
CFK40_01050 CDS
T04976
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
vne
Virgibacillus necropolis
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vne03021
]
CFK40_01050
Transcription machinery [BR:
vne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFK40_01050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_38
HTH_16
HTH_23
Lebercilin
Motif
Other DBs
NCBI-ProteinID:
ASN03699
UniProt:
A0A221M7U7
LinkDB
All DBs
Position
complement(191348..191998)
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AA seq
216 aa
AA seq
DB search
MNVKQLETENDNLNALDDNAIIHLIHEGNSRALDYLIHKYKNFVRAKARTYFLIGADKED
IVQEGMIGLYKAIRDFDSDKLSSFKAFAELCITRQIITAVKTSTRQKHIPLNSYVSLDKP
VYDEESDRTLLDIIAGSRSIDPQELLVSREKYTDMESKLSELLSELEKKSLHLYLDGKSY
QEISVELKRHVKSIDNALQRVKRKFEQLIESQEITL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtcaagcagctagagacagaaaacgataacttaaacgcgcttgatgataacgct
atcattcatcttattcatgaaggtaatagccgtgcgcttgattatttaattcacaaatat
aaaaactttgtgcgagcaaaagcacgaacctattttttaataggagctgataaagaagat
attgtccaagaaggtatgataggtctttataaagcaatccgtgattttgattcggacaag
ctctcttcttttaaagcttttgccgaactgtgtatcacaagacaaattattacagcagta
aaaacatcaacacgacaaaagcatataccattgaattcttatgtttcactcgacaaacca
gtgtatgatgaggaatctgaccgaacattattagatattattgcaggctcaagatctatt
gatccacaagaattactcgtgagccgtgaaaaatacacggatatggaatctaaattatcg
gaattattaagcgagttagagaagaaatcactgcatctatatctagatggcaagtcatat
caagagatatccgtggaactaaaacgtcacgtgaaatcaattgacaatgcactgcaacga
gtaaaacgtaaattcgagcaattgatagaatcacaggaaataaccttataa
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