Virgibacillus necropolis: CFK40_05000
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Entry
CFK40_05000 CDS
T04976
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vne
Virgibacillus necropolis
Pathway
vne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK40_05000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_05000
Enzymes [BR:
vne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFK40_05000
DNA repair and recombination proteins [BR:
vne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFK40_05000
Prokaryotic type
CFK40_05000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASN04411
UniProt:
A0A221M9W7
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All DBs
Position
1081829..1082512
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AA seq
227 aa
AA seq
DB search
MSKQILENDWKPLLNEEFKKPYYVELRAFLKDEYNKHTVYPQMDDIFNALHFTPFHNVKV
VMLGQDPYHGPDQAHGLSFSVKPGVAVPPSLKNIFREMKDDVGCPMPEDGYLAGWANQGV
LLLNTVMTVRKGQAHSHQGMGWEKFTDRVITLLNEKDTPVVYILWGRAAQNKEALIDTDK
HYLIKAPHPSPLSAHRGFFGSKPFSKTNQLLKQIGYDGIHWGAVKGD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagattttggaaaatgattggaagccgttgttgaatgaggaatttaagaaa
ccgtattacgtggaattacgtgcatttttgaaagacgaatataataaacataccgtgtat
ccgcaaatggatgatattttcaatgcacttcatttcacccctttccataacgtaaaggtg
gttatgcttggacaagatccctaccatggtccggatcaggctcacgggttgagtttttct
gtgaaaccaggtgtagctgtaccaccatctctaaaaaatattttccgagaaatgaaagat
gacgttggttgtcctatgcctgaagatggttacctagctggttgggcgaaccagggtgtg
ttattgctgaatacagtgatgactgtgagaaaaggacaagcccactctcatcaaggaatg
ggatgggagaaattcacagatcgggtaattacattattgaatgaaaaggatacgcctgtt
gtttacattctgtgggggcgtgctgcacaaaacaaagaagcactaattgatacagataaa
cattatttgattaaggctccgcacccgagtcctctgtccgcgcatcggggtttctttggt
agcaagcctttttccaaaaccaatcaattactaaaacaaattggatatgacggtattcac
tggggagcggtgaagggagattga
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