Virgibacillus necropolis: CFK40_08570
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Entry
CFK40_08570 CDS
T04976
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
vne
Virgibacillus necropolis
Pathway
vne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK40_08570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vne03400
]
CFK40_08570
DNA repair and recombination proteins [BR:
vne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK40_08570
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ASN05062
UniProt:
A0A221MBR9
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Position
1838250..1840025
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AA seq
591 aa
AA seq
DB search
MNQTIKEKLAVLPVQPGCYLMKDKHNTIIYVGKSKALKNRVKSYFAGANDKKTQRLVSEI
QDFEYIVTTSEIEALILEMNLIKKYDPKYNVLLKDDKSYPYLKITSERHPRLLVVRKVKK
DKGKYFGPYPNVIAARETKKLLDRLYPLRKCNKMPDRVCLYYHMKQCLAPCVYPVSEETN
RSIVQSIATFLNGGHKEIKRDIKEKMYQASEDLDFERAKELRDQIQHIEAVMEQQKMTLK
DQINRDIFGYSYDKGWMCIQVFFVRQGKLIERDVAIFPFFDDPEETFISYIGRFYLHQHH
PKPKQILLPLGADADLLKELLEIDINVPYRGRKKDLVKLAMKNAKIALEEKFSIIEIDEE
RTINAVENLGEKLNIEIPHRIEAFDNSNIQGTDPVSAMVVFIDGRPNKKEYRKYKVRDVT
GPDDYETMREVIRRRYSRVLKEKLPLPDLIMVDGSKGQMSAALDVLENELGLDIPLCGLA
KDDKHKTSELLYGSPPTIIDLSRKSQEFYLVQRIQDEVHRFAITFHRQLRGKNLFQSELD
KIPGVGEKRRKLLLTHFKSIDEIKNKSIADITKLGIPTNTAELILDHLTKD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacaataaaagagaaattagctgtccttcccgtacaacccggatgttattta
atgaaagataaacacaatacgattatatatgttggaaaatcgaaggcactaaaaaacagg
gtgaaatcttattttgctggtgcaaatgataaaaagacgcagcgtttagtatcagaaata
caagattttgaatatatcgtaaccacttcagaaattgaagcactcatattagaaatgaat
ttaataaaaaagtatgatccaaaatataatgtgctactaaaggatgataagtcatatccg
tatttgaaaataacttctgaacgccatccaaggttgttggttgtacgtaaagtgaaaaaa
gataaagggaaatactttgggccttatccgaacgttattgctgctcgggaaacaaagaaa
ttattagatcgattatacccattacgaaaatgtaataaaatgcctgacagagtgtgtttg
tactaccacatgaagcaatgtttagctccatgcgtttatccagtctcagaagaaacaaac
cgttctattgtgcaaagtatagcaacattcttaaatggtggacataaggaaataaaaaga
gatattaaagagaaaatgtaccaagcaagtgaagatttagactttgaacgagcaaaagag
ttaagggaccaaattcagcatatagaagcagttatggaacaacagaagatgacgctaaaa
gatcaaatcaatcgagacatctttggatacagctatgacaaaggatggatgtgtatccaa
gtattttttgtcagacagggaaaattgatcgagcgtgatgtagccatttttccattcttt
gatgatccagaagaaacgtttattagttatataggtcggttttatctacaccagcatcac
ccaaagccaaagcaaatattattaccgcttggagctgatgcagaccttttaaaggaattg
cttgaaattgatataaacgtcccatatcggggtcgaaaaaaagacttagttaagcttgca
atgaaaaatgcaaaaattgctcttgaagaaaaattttctattattgaaatagatgaggaa
cgaactattaatgcggtagaaaacttaggtgaaaaactaaacatcgaaattccccatagg
attgaagcctttgataattcaaacattcaaggaacagatccagtatcagcaatggttgtt
tttatagatggtagaccaaacaagaaagagtatcgtaaatataaagtaagagatgttaca
ggtccagatgattatgaaacaatgcgagaagtaataagacggagatattcacgtgtatta
aaggaaaagttgccgctaccagatcttattatggtagatggttctaaaggacaaatgagc
gcagcgttagatgtgctagaaaatgaattaggacttgatattcctttatgtggtttagca
aaggatgacaagcataaaacaagcgagctactttatgggagtcctcccacaataattgat
ttatcgagaaaatcacaagaattttatttggttcaacgaattcaggatgaagttcaccgt
tttgccataacttttcatcggcaattacgagggaaaaacttatttcaatcagaactagat
aaaattccgggagtaggcgaaaaaagaaggaaattgctcttaacacactttaagtcaatt
gacgagataaaaaataaatcaattgcagatataacaaagctcggtattcctacaaataca
gcggaattgattctagatcacctaacaaaagattaa
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