Vibrio nigripulchritudo: VIBNI_A0121
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Entry
VIBNI_A0121 CDS
T02871
Definition
(GenBank) putative GGDEF domain and PAS/PAC domain protein
KO
K20961
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBNI_A0121
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VIBNI_A0121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_8
PAS
HAMP
Motif
Other DBs
NCBI-ProteinID:
CCO56331
UniProt:
U4K1C9
LinkDB
All DBs
Position
1:111829..113427
Genome map
AA seq
532 aa
AA seq
DB search
MNKQALANRLLVTVVIFSLMYLVLAASFLTLFYFERASLNVRDMEEKLVLTVSNSASIAL
YVDNPEIADEVMSSLLLHDEFNGVKLKGIDGIEFSLSKLTSNREQWQNLERFPLVSPVKD
EVIGHLILDVNQEYLDSVTQEKVFIQLVMLISQLLMLLIVTAFAVRKVIGFPLQKLAENL
SKVEPGKDELLPYNNENRDNEIGLVTASVNRFVEASHQAIETERNLRATIERMERHYRHI
FETTQVGILVLDKNGHLIHSNPTLFGRLIKESFELTAILETQPFFEHVFQNPELAWQMSE
QTISSGDMASGDLRINKRYSADQWVHLLLSAHKDEHSGEWLIEGIMYDITVRVQKERDTL
LLALEDNLTGLKNRRGCERFVATLASQKKAAYIATMMLDLDGFKDVNDTHGHAAGDEVLC
TIARRLKRVARGGQDVIGRIGGDELLVILALEQINPDVLAGIAEQIVEICARPIELPSRS
TVRIGGSVGVAYAGVNDIEFDALLQQADEAMYKVKENGKNGYAFYNPELRRA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaagcgcttgctaatcggcttttagttaccgttgtcatattctcgctcatg
tacctggtattggcagcgagttttttgactctgttctattttgagagagccagtctgaat
gttcgtgatatggaagagaaattggtcctgacggtatccaactctgcttctatcgccttg
tatgtcgataaccctgaaattgcagacgaagtcatgagctcgttgcttcttcacgatgaa
ttcaatggggtaaaactcaaaggaatcgatggtattgagtttagcttgtcaaagctcacc
agtaatcgagagcaatggcagaacctggaacgatttccgctggtttctccggtgaaagat
gaagtgattggtcatctgattctggatgtgaatcaggagtatctggattcggtcactcag
gagaaagttttcatccagctagtgatgctgattagtcagttgctgatgctgctgattgtg
acggcctttgcggttcgaaaagtcattggttttccgcttcagaaactcgctgaaaacctg
tctaaagtggagccaggtaaagatgagttacttccttataataacgaaaaccgcgacaac
gaaattgggttggttaccgccagcgtaaaccgttttgttgaagcctctcatcaggcaata
gaaaccgagcgcaacctcagagccactatcgaacgcatggagcgtcattatcgacatata
ttcgaaaccactcaggttggaattctggttctcgataaaaatgggcatttaattcacagt
aacccaacgctgtttggccgattaatcaaagagagttttgagctgacggctattcttgaa
actcagccattttttgaacacgtttttcagaacccagaactcgcgtggcaaatgtcagag
cagaccatatccagtggtgatatggcgtcgggtgatttgcgtattaacaaacgctacagc
gcggaccaatgggtgcacctactgctctcggctcataaggatgagcacagtggggaatgg
ctcattgagggcattatgtatgacatcacggtgcgagtgcagaaagagagagacactttg
ctgcttgcgttagaagataatctgacaggtctcaaaaaccgtcgaggatgcgaacgattc
gttgccactctcgcaagtcagaaaaaagccgcatacatcgcgaccatgatgctggattta
gatggcttcaaggatgttaatgatactcatggacatgcggcaggggacgaggtgctttgc
accattgccaggcgcttgaagagagtcgcgcgtggcgggcaggatgtcattgggcggata
gggggcgatgaacttttggtgattctcgccttggagcagatcaatccggatgtactggca
ggcattgccgaacagattgtagagatctgcgccagaccgattgagctgccttcccgttca
actgttcggatcggcggcagcgtaggtgttgcctacgctggagtgaatgatattgaattt
gatgccttacttcagcaagctgacgaagccatgtataaggttaaggaaaacggcaaaaac
ggctatgcgttttataacccggagcttcgccgcgcttag
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