Vibrio nigripulchritudo: VIBNI_A0149
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Entry
VIBNI_A0149 CDS
T02871
Gene name
alaS
Definition
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VIBNI_A0149 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vni01007
]
VIBNI_A0149 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vni03016
]
VIBNI_A0149 (alaS)
Enzymes [BR:
vni01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
VIBNI_A0149 (alaS)
Amino acid related enzymes [BR:
vni01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VIBNI_A0149 (alaS)
Transfer RNA biogenesis [BR:
vni03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VIBNI_A0149 (alaS)
Prokaryotic type
VIBNI_A0149 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DMPK_coil
BAT
FANCAA
Fungal_TACC
Flagellar_rod
Motif
Other DBs
NCBI-ProteinID:
CCO56356
UniProt:
U4K1E9
LinkDB
All DBs
Position
1:146372..148954
Genome map
AA seq
860 aa
AA seq
DB search
MYMSTDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYT
RATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLQ
LPKDRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMGDTGPCGP
CTEIFYDHGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI
ERISAIMQGVHSNYEIDVFQTLIKAAAEVTGHEDLSNQSLRVVADHIRSCAFLIVDGVMP
SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLAEVMGTAGVELKKQQALVEKVLR
IEEENFGRTLERGMSILNEALDGLDGKVLDGETVFKLYDTYGFPADLTNDVARERDFAID
EEGFEKAMEAQRQRAREAGQFGTDYNAAIKVDASTEFCGYTGTEGSSTVSALFVEGNEVE
ALSAGDKAIVILEETPFYGESGGQCGDTGTLKTDAGLFQVEDTQKLNNAIAHHGVLVEGV
FAKGDSVAATVDAARRAAIILNHSATHLLHAALRHVLGDHVAQKGSLVKAEGLRFDFSHL
EAMTPAEIKEVERLVNIHVRRNHNIQTDIMNIEDAKAKGAMALFGEKYDDQVRVLTMGEF
STELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAENSKYEEKLSEA
ASKAKALEKEIQQLKDKLASQASASLTSQVKEIAGVKVLVSKLDGADNKALRGMVDELKN
QLGSGIIMLGNVAGDKVGLIAGVTKDLTGKVKAGELVNMVAQQVGGKGGGRPDMAQAGGT
DANALPAALDSVDAWLEERL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgagcacagatgaggttcgtaacgcgttcctcaagttctttgaaagcaaagga
caccaaatcgtagacagttcatcgttagtaccacataacgatccaaccctgctatttact
aacgcaggtatgaaccaatttaaagattgtttcttaggcttagaaaaacgagcctacact
cgagcgactacggcccaacgctgtgtacgtgctggcggtaagcacaatgaccttgaaaac
gtgggttttacagctcgccaccataccttcttcgaaatgttgggtaacttcagcttcggt
gattacttcaaagaagacgcgatctcgtttgcctgggaatttctgacagaagttcttcaa
cttccgaaagaccgtctgttggtgactgtttatgaaaccgacgatgaagcttttgatatc
tggaacaaaaaagtaggtgttccagctgatcgtattgttcgcatcggcgacaaagaaggc
ggtaagccatacgagtcagacaatttctggcaaatgggtgacacaggtccatgtggtcca
tgtactgaaatcttctacgatcacggcgatcacatctggggcggtcgtccgggcacacca
gaagaagacggtgaccgttttatcgagatttggaacaacgtattcatgcaatttaaccgt
catgccgatggcacgatggaaccgctaccaaaaccatcggtagacacgggcatgggtatc
gagcgtatttctgccatcatgcagggcgtgcattccaactacgaaatcgatgttttccaa
acgctgattaaagctgctgctgaggtgactggtcacgaagacctgtctaaccaatcgctc
cgcgtagttgctgaccacatccgttcatgtgcgttcctgatcgttgatggtgtaatgccg
tcaaacgaaggtcgtggctacgtacttcgccgtattatccgccgtgctgttcgccacggt
aataagttgggagcacaaggtgcgttcttccacaagctggttggtgtactggcagaggtg
atgggcacggcgggtgttgaacttaagaagcaacaagcactggttgaaaaagtacttcgc
attgaagaagagaactttggtcgcacgctagagcgtggcatgtctatcctaaacgaagcg
ttagatggtttggacggcaaagtacttgatggcgaaacagtattcaaactttacgatacc
tatggcttcccagcagatttaaccaacgacgtagcgcgtgagcgtgactttgctatcgac
gaagaaggcttcgagaaagcaatggaagctcagcgtcagcgtgcacgtgaagcaggtcag
tttggtacagactacaatgctgccatcaaagtggatgcgtctaccgagttctgtggatac
acaggcaccgaaggcagcagcacagtgtcggcactgttcgttgaaggtaacgaagtcgaa
gcattgtccgcgggcgacaaagccatcgtgattcttgaagaaacaccattttatggtgag
tcaggtggtcagtgtggtgacacaggtacattgaaaactgacgctggtcttttccaggtt
gaagatactcaaaagctaaacaacgcaattgcgcaccatggtgtgttggttgaaggtgtt
tttgccaaaggtgatagcgttgcagcaactgttgatgctgcgcgtcgtgcagcgatcatt
ctaaaccactcagcgactcacctactgcacgcggcgcttcgccatgtactgggtgatcac
gtggctcagaaaggctcacttgtaaaagctgaaggtctacgatttgacttctctcatctt
gaagcaatgacacctgcagaaatcaaagaagttgagcgtttggtaaacattcacgttcgc
cgtaaccataatatccagacagacatcatgaacatcgaagacgcaaaagcgaaaggtgcg
atggctctgttcggtgaaaaatacgacgaccaagtgcgtgttcttaccatgggtgaattc
tcaaccgaattgtgtggcggtattcacgcctcaagcacgggtgatattggcctattcaag
ataacctcagaaggtggtatcgcagcaggtattcgacgtattgaagctgtgacaggtgaa
ggtgcgctggacgctatcgaagccgaaaatagcaaatacgaagagaagctttctgaagca
gcaagcaaagcgaaagctcttgagaaagagattcaacagctaaaagacaagttggcatct
caggctagtgcaagcctgactagtcaggtaaaagaaattgctggcgtgaaagtacttgtg
tctaagctggacggcgcagacaacaaagcactacgcggcatggttgacgagcttaagaat
cagcttggtagcggtatcatcatgctaggtaatgttgctggcgacaaagttggtctgatc
gcaggcgtgaccaaagatctgacaggcaaagtgaaagccggcgaactggtcaacatggtt
gctcaacaagttggtggtaaaggcggtggtcgtcctgatatggcgcaagccggtggtact
gatgccaatgcacttccagcagcgctagactcagttgatgcctggctagaagagcgtttg
taa
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integrated database retrieval system
