Vibrio nigripulchritudo: VIBNI_A0164
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Entry
VIBNI_A0164 CDS
T02871
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni02024
Quorum sensing
vni03060
Protein export
vni03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VIBNI_A0164 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VIBNI_A0164 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIBNI_A0164 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vni02044
]
VIBNI_A0164 (ffh)
Enzymes [BR:
vni01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VIBNI_A0164 (ffh)
Secretion system [BR:
vni02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VIBNI_A0164 (ffh)
Eukaryotic Sec-SRP protein
VIBNI_A0164 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
KTI12
AAA_31
Mg_chelatase
AAA_33
AAA_26
AAA_30
AAA_19
APS_kinase
T2SSE
AAA_18
ATP_bind_1
Rad17
VirC1
AAA_24
AAA_14
AAA_16
YqeC
ArsA_ATPase
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
CCO56371
UniProt:
U4K1G2
LinkDB
All DBs
Position
1:166320..167705
Genome browser
AA seq
461 aa
AA seq
DB search
MFENLTDRLSSTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFIKRVKEGAV
GVEVSKSLTPGQEFIKIVQNELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLSERDKKKVLVVSADVYRPAAIKQLETLAGDVGVDFFPSSADQKPIDIANAAIDHAK
KKFYDVLLVDTAGRLAVDHEMMEEIQELHSAITPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDQDKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMSQL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPEIIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGGFNPFGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaacggatagactatccagtacgctgaaaaacatcagcggcaaaggt
cgactgaccgaagacaatatcaaagataccctgcgcgaagtacgcatggcattgttggaa
gcggacgtagcgcttccggttgtgcgcgattttatcaagcgcgtaaaagaaggcgccgtt
ggcgttgaagtttctaaatctctgactcctggtcaggaattcatcaagatcgttcaaaat
gaacttgaagcggtcatgggagagtcaaacgaggctcttaaccttgcggcgcaaccgcct
gctgtaattcttatggcgggtctgcaaggtgcgggtaaaaccaccagtgtcggtaagctt
tccaaactcttaagtgaacgcgataagaagaaagtgcttgttgtgtctgccgacgtttac
cgccctgcggcgatcaaacagttggaaacactagccggtgatgtgggcgttgatttcttc
ccgtcttctgctgatcagaagccaatagacattgctaatgcagccattgatcacgcgaag
aagaaattctacgacgtgctattggtcgataccgcgggtcgtttggcggttgaccacgaa
atgatggaagagatccaagagctgcactcagctatcactccagtggagactctgttcgta
gttgatgccatgacgggtcaggatgcagcaaatactgcaaaagcgtttggtgatgccctt
ccactaactggtgtgattctgacgaaggtagacggtgatgcacgtggtggtgcggctctg
tcggttcgtcacatcacaggtaagccaatcaaattcttgggtgtcggcgaaaaaaccgat
gcgttagaacctttccatccggaccgtgttgcatcgcgaattcttggtatgggcgacgtg
ctgtctctgatcgaagatttgcagcgcaatgtcgatcaggataaagctgaaaaactggcg
aagaagtttaaagaaaagaaaggcttcgatctggaagatttccgcgagcagcttggtcag
atgcagaatatgggcggcatgatgggaatgatggacaaactcccgggcatgtctcagctt
cctgataatgtgaaagacaaagtcgacgacaagatgttcaagcagatggaagccatcatt
aactccatgaccatgaaagagcgtcagcgccctgaaatcatcaaaggctcacgtaaaaag
cgtatcgcagcgggctccggtactcaggtacaggatgttaaccgcttgctgaagcagttc
actcaaatgcagaaaatgatgaagaaaatgcagaaaggtggcatgaaaggcatgatgcgt
aacatgcaaggcatgatgggtggaatgggaggcatgggcggcggttttaatccgttcggt
cgataa
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