KEGG   Vibrio nigripulchritudo: VIBNI_A3439
Entry
VIBNI_A3439       CDS       T02871                                 
Name
(GenBank) putative Type I site-specific restriction-modification system, R (restriction) subunit and related helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vni  Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:vni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vni02048]
    VIBNI_A3439
Enzymes [BR:vni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VIBNI_A3439
Prokaryotic defense system [BR:vni02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VIBNI_A3439
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII SurA_N DUF3375 DEAD DUF445
Other DBs
NCBI-ProteinID: CCO59425
UniProt: U4K9N7
LinkDB
Position
1:complement(3616486..3619680)
AA seq 1064 aa
MTYTEDGLVEQPAIALFDSLDWGTETCWDEAFGNETEGDLAFGRETRNDVVLTSRLREAL
LKLNKGIPSLILQEAVDEMCRDRSSMSDIAANEAIYLLLKDGYVYTSTSDDEEDFVVRYI
DWETVDNNDFLLCSQMSISGEIETRRPDLLGFVNGLPLLFIELKTSHKNLFNAYKDNLKD
YRNTIPRLFHYNQIIVLSNGIQSRVGSISSQWEHFAEWKKVESEKEPRRVSLEVVIRGVC
ERTRFLDIIENYILFVKKKQTLKIVAKYHQYLGVNQALEGLTNVKERSGQLGVFWHTQGS
GKSFSMVFFCKKAFRKYTGNWTFVLITDRTDLDDQIYKTFHSSGALTENCQAESGAELKT
LLAEDHRFVFTLIQKFKGDEKGNYPLLSERDDIIVITDEAHRSQYDSLAMNMRSSMPNAS
YMAFTGTPLLSDQVSEEGSNESGKTQEIFGDYISIYNFADAVDDGATLPLYYENRVPEVN
LSRDDVGDEIVDIIEQADLTDEQEEKLEREFSKSYHIITRDDRLETIAKDLVEHYINRAP
FQGGQLGKAMVVSIDKATAIKMYDKVSVAWQVKLKSLKSQAKFAKGSRLSKLEFQIEHME
STDMAVVVSGEQNDEERLAKKGLDYKTHRERMIKEDIDEKFKDSEDNLRIVFVCAMWLTG
FDAPSVSTLYLDKPLKNHTLMQTIARANRVFPGKSAGQVVDYINIFSALQVALGLYGGGQ
VAEPGAGYGVDSPARDKRELVAALAIAIGELKAFLSKQDVDIDAVISAPAEGFTKLKMLD
DASEILLAPDLKDEFTAFVRQINRIFKAVLPDDDANEYVPHRIAINVIYAQMRQKSGVSI
DDEDVLDVVRHQVNELLDESITTIQIKSNLPEPINIAGIDFDALAEMVTKIKKPQKSDAE
RLRNIIERKLQPMMLKNKSRQDLQQKFQDLIDEYNLGAYTAEEFFQRLSGFLHDLDHEEK
RTVREGLSEEELAVFDLMTQELPLNEKERNEVKRIAKDLIDNMKELLVIDWRKKQRTKAR
VRSYIEDVLDRLPESYDDELWPKTCSEVYMHVYEKYPGQGVSVY
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgacatacacagaagatggtttagttgaacagcctgctatagcgctatttgatagcctt
gattggggcacagaaacctgttgggatgaagcttttggtaatgagactgaaggtgacctc
gcgtttgggcgtgaaactcgtaatgatgttgttttaactagccgtcttcgtgaggcttta
cttaagttaaataagggtatcccatctctaatattgcaggaagcagtggatgagatgtgt
cgtgaccgttcatctatgagtgatattgccgcaaatgaagcgatatacctgctgttgaaa
gatggatatgtctacacgtctacttctgatgatgaagaagattttgttgtccgttatatc
gattgggaaacagtggataataatgactttttgctttgtagccaaatgtcgatttccgga
gagatcgagactcgacgcccagacctattaggctttgtaaatggcttacctttgttattt
attgagcttaaaacgagccataagaacctctttaatgcctacaaagataatctaaaagac
taccgcaataccattcctcggctgtttcactataaccaaataattgtcctatcaaacggt
attcaatcacgggtgggctctatttctagccagtgggaacactttgcagaatggaagaaa
gttgagagtgaaaaagagcctcgccgcgtaagtcttgaagtcgttatcagaggtgtgtgc
gagcgcactcgcttcttggatattattgaaaactacatattgtttgtgaaaaaaaagcag
acattaaaaattgttgccaaataccatcagtaccttggggtaaaccaagccttagaaggg
cttactaatgtaaaagagcgttcaggtcagttgggtgttttttggcacacacaaggtagc
ggtaaaagcttctcaatggttttcttctgtaaaaaggcattccgaaaatacactggaaac
tggacatttgtgcttattactgaccgtacagacttagatgaccaaatatataaaactttc
cactcttctggagcattaaccgagaactgccaagctgaatctggtgctgagcttaaaaca
ctactcgcagaagaccaccgcttcgttttcacattgattcaaaaattcaagggggatgaa
aaaggaaattaccctcttttgtctgaacgtgatgacatcatagtaatcaccgatgaagcg
cacagaagtcaatatgactctttagcgatgaacatgcgtagttccatgccaaatgcttcc
tatatggcttttacgggcactcctttgctatctgaccaggtgtcagaagaaggaagtaac
gagagcggaaaaacccaagagatatttggtgactacatcagtatctataactttgcagat
gctgttgatgatggcgccacattgccattgtattacgaaaacagagttccagaagtcaac
ttatcccgtgacgatgttggcgatgaaattgtagatattattgaacaagcagatctgaca
gatgagcaagaagaaaagctagagcgagaatttagtaagtcttatcacatcatcacccgt
gacgaccgattggaaacaatagccaaagacttagtcgagcactacatcaatagagctcct
ttccaaggtggtcagttgggcaaagcaatggttgtttctattgataaagctactgcaatc
aaaatgtacgataaggtttcagttgcatggcaagtaaagctgaaaagcctaaaatctcag
gctaagtttgctaaaggtagtcgattatcgaagctcgagtttcaaattgaacatatggaa
tcaacagatatggcagttgttgtatctggtgagcaaaatgatgaagagcgcttagctaag
aagggcctagactacaagacacacagagagcgtatgatcaaagaggatattgatgaaaaa
ttcaaagattcagaagacaaccttcgtatcgtttttgtttgtgcgatgtggcttactggc
tttgatgcaccatcagtttcgaccctctatttagacaagccacttaagaaccacactttg
atgcagacgattgctcgtgcgaaccgagtattccctggcaagagtgcgggtcaggtcgtc
gattatattaatatctttagtgcattacaggttgctcttggcctctatggtggagggcaa
gtcgcagagccaggtgcgggttatggtgttgatagcccagccagagataagcgagagcta
gttgcagcattagccattgcgattggtgagctaaaggctttcttatcaaagcaagatgtt
gacatcgatgcagtgatatcagcccctgcagaaggttttacaaagctgaaaatgcttgat
gatgcgagtgaaatactgcttgctccagatctcaaagatgagttcaccgcctttgttcgc
caaataaatcggatcttcaaagcggttcttcccgatgacgacgcaaatgaatacgtacct
catcgcattgctatcaatgtgatttatgctcagatgcgccagaaatcaggtgtttcaatt
gatgatgaagatgtgctggatgtggtgcgccatcaagttaatgaactacttgatgagtct
attacgactatccagataaagagcaatctcccagagccaatcaatatcgcaggtattgat
tttgatgctctggctgaaatggtaacgaagattaaaaagcctcaaaagtcggatgccgaa
cgcttaagaaatatcattgaacgaaagctgcaaccaatgatgctgaaaaataagtcacgt
caggacttacagcaaaaattccaagatcttattgatgaatataaccttggcgcttataca
gcagaggagttctttcaacggctttctggattcttacatgaccttgaccacgaagagaaa
agaacggttagagaagggcttagtgaagaagagttagctgtctttgatttgatgactcag
gaattaccgctcaatgaaaaagagcgaaacgaagttaaacgtatagcgaaagacttgatt
gataacatgaaggagttgctggttatcgactggcgcaagaagcagagaaccaaagctcgt
gttcgcagttatattgaagatgttttagatcgtctaccggaatcatacgatgatgaacta
tggccaaaaacttgttctgaagtttatatgcatgtttatgagaagtatccagggcaaggg
gtgagtgtttactaa

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