Vibrio neocaledonicus: D3H41_12610
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Entry
D3H41_12610 CDS
T06228
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_12610 (truC)
Enzymes [BR:
vnl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
D3H41_12610 (truC)
Transfer RNA biogenesis [BR:
vnl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
D3H41_12610 (truC)
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GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QCO86862
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All DBs
Position
1:complement(2538793..2539563)
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AA seq
256 aa
AA seq
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MLEQELTRSSEPVELEIVYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHV
FPLHRLDRPTSGVLVFALSSEVASQVMPMFAEHKMEKTYHAIVRGWIEEEGVLDYALKVE
LDKIADKFASQEKEAQEAVTEYKPLAKVEVPYSTGKFPTTRYCLVEMKPKTGRKHQLRRH
MAHLRHPIVGDTTHGDGKHNKLYRTEFDSHRLLLHASELRFVHPFTDQEIVMTANLDETW
QQLFTRFEWDESMVNR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgctagaacaagaactaacgcgatcttcagaaccagttgagctggagatcgtttatcag
gatgaatattttgtagcggtcaacaagcctgcaggcatgttagtgcatcgcagttggtta
gataaacacgaaactcagtttgtcatgcaaactttgcgcgaccaaattggtcagcatgtg
ttcccattgcatcgtctggatcgtccaacatctggtgtgctcgtgtttgcgttgtcgagt
gaagtcgcatcacaagtcatgccgatgtttgctgaacataaaatggaaaagacataccac
gcaatagtacgcggttggattgaggaagagggcgttttggattacgcgctcaaagtcgag
ttagacaagattgcggataagttcgcttcacaagaaaaagaagcgcaagaagcggtgacg
gaatataagccgttggctaaagtggaggttccctattcgacgggtaaatttcctacaacg
cgttattgcttagttgagatgaaacctaaaacggggcgtaagcaccaacttcgtcgtcat
atggcacatctacgccatccgatcgtgggtgatacaacgcacggggatggaaagcacaac
aagctgtatcgcacagagtttgattctcatcgtttgctactgcatgcttcagagttacgg
ttcgtccatccatttaccgatcaagagattgtcatgacggctaatcttgatgaaacttgg
cagcaattgttcactcgatttgagtgggatgaatcgatggttaaccgataa
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integrated database retrieval system
