Vibrio neocaledonicus: D3H41_19345
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Entry
D3H41_19345 CDS
T06228
Name
(GenBank) EAL domain-containing protein
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
D3H41_19345
Enzymes [BR:
vnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
D3H41_19345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
CCSMST1
Motif
Other DBs
NCBI-ProteinID:
QCO88173
LinkDB
All DBs
Position
2:552586..554946
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AA seq
786 aa
AA seq
DB search
MKLSNRVILLVAPVILLSALVSSYIIYSIQKVTLIKREDSYIQLQMEKLAGQFRQANIFL
NSYAYTLSKSDVLQDYLVNHNNPYRERVLFNRLDETAEVLSHGYKGDASMAILDGKQNLL
YYTENKYYESSGVVDPKVLEYISRSFNEREAFSHTGFIYNSSGQSILLQYEVVDKRTGTH
PLSFDSKNVFFVVVSVSLEAFNEIKHEIEFDTHSVITFADKPIYLDIPLAQTIELLPHFY
AVLSPAEYLMWNKVDKVWLELAFSFGVAAFFTITLIILVLYRYVLRPVSRLDKQLNELES
NQRDNIEKLETNDEIGRLSARFFDMYEELNVIYKKTKRLAETDHLTQLANRHRFHELATR
ELLSPSQFLWVVYVDLDNFKYVNDKYGHELGDNLLKVFSSHIKNACQKFSHDYNSPCFAA
RLSGDEFAILLSSNQEVKRLPDLLASELLKPISNLSSSWSNSFPVTASVGIAQYPQDGTD
IAKLLSSADAAMYQAKRAGKNQYAYYSAALNIESQRRSQLERALRKSNVEEEFHLVFQPY
MNNRSNEIEGLEVLLRWEAEGIGPIPPKEFIPIAEQAGLFDKIDRWVFANATAEYHQLRN
IFGKNIVLSVNLSSAELNSIEMANYIHEQATLHSVKPECIEIEITETFAAEQQGTALLDE
LSKRGYRLAIDDFGSGYTSLTQLVQYPVQKIKFDREFLVTLMNTNNGHVIKPIIELCHAQ
NKTVTAEGIEHNMMHEWLSAYRCDYMQGYLFGKPMTKEQLSLWWQSANDDSRFDASMVSS
IRVSRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaagcaatagagtcattttgcttgtcgcgccagtgatcttattaagcgcgtta
gtatctagctatattatttatagcattcaaaaagtgacgctcatcaagcgggaagacagc
tatattcagttgcaaatggaaaagctcgccgggcagtttcgacaagcgaatatttttctt
aatagttatgcctatacgctcagtaaaagtgatgtattacaagactatttggttaatcat
aacaacccctatcgtgaacgagtcttgtttaaccgattagacgagaccgctgaagtattg
agccatggttacaaaggcgatgcgagcatggcgatcctcgacggcaaacaaaaccttctc
tactacacagaaaacaaatattacgaatcatcaggtgtggtcgacccaaaggtgttagag
tacatatcacgaagtttcaatgagagagaggctttcagtcacactggctttatttataac
tccagtggacaaagcattcttcttcaatatgaggtcgtcgacaaaagaacggggactcac
cctttgagctttgactcaaaaaatgtgttttttgtggtagtttccgtatcacttgaagcc
tttaacgagattaagcatgaaatcgagtttgacacgcacagcgtgattactttcgccgac
aaacccatttatcttgatattcctctcgctcaaaccattgagctgctgccgcacttttat
gccgtgctttctcctgccgaatatttaatgtggaataaagtcgataaagtgtggctagaa
cttgctttctcctttggcgtagcggcgtttttcaccatcacattaatcattttggtgttg
taccgctatgtgttgcgtcctgtttctcgccttgataagcagctgaacgaacttgaatct
aatcaacgtgacaatattgaaaagctagaaacaaacgatgaaataggacgcctctctgca
cgcttttttgatatgtatgaggaacttaatgtcatctataaaaagacaaaacgcctagct
gaaacggatcacctgacgcaactcgccaatcgccatcgttttcatgagcttgccactcgt
gaacttctctccccttcgcagtttctgtgggttgtttacgtcgatcttgataactttaaa
tacgtgaatgataaatacgggcatgaattgggagataacttattaaaagtgttctcatca
cacatcaagaatgcctgtcaaaagttctcgcacgattacaacagcccctgctttgccgcc
aggttatctggtgacgaatttgcaattttgctgagctcaaatcaagaggtaaaacgcttg
cctgatttgcttgcatcagagctgctaaaaccgattagtaatctcagttcatcttggagt
aattcatttcccgttacggcaagcgtaggtattgcacaatatcctcaagacggtactgac
atcgcgaagttactctccagtgccgatgcggctatgtatcaagcaaaacgggcagggaaa
aatcaatacgcctattattcagccgctctcaatattgagtctcaaagacgaagtcaactt
gaacgtgcgctccgaaaaagcaatgtagaggaagaatttcaccttgtttttcaaccctat
atgaacaatcgaagcaacgaaattgaggggttagaagtcttgttgcgctgggaagccgaa
ggtatcggccctatccctccaaaggagtttattccaattgctgagcaagccggattattt
gataaaattgaccgctgggttttcgccaatgcaacggcggaataccatcaattaaggaat
attttcggtaagaatattgttctttcggtcaatctttcatcagcagagctaaactcgata
gaaatggcaaactacatccatgaacaagcgacactgcacagtgttaaaccagaatgtatt
gagatagaaataaccgaaacctttgccgcagaacaacaaggcacggctctacttgatgag
ctatcaaaacgtggctaccgtcttgcaattgatgactttggttctggttacacatcgtta
actcagctcgttcagtatccggttcaaaaaatcaaatttgatcgagagttcctcgttaca
ttgatgaacaccaacaacggccatgtgatcaaacctattattgagctatgccatgcccaa
aataaaacggttacagcagaaggtattgaacacaatatgatgcatgaatggctatcggca
taccgctgcgactatatgcaaggctatttatttggcaaaccaatgactaaagaacaattg
agcttgtggtggcaatcggcaaatgacgacagtcgatttgatgcgtccatggtcagctca
attagggtttcaagaacataa
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