Variovorax paradoxus B4: VAPA_1c09890 Help Entry VAPA_1c09890      CDS       T02835                                  Name (GenBank) putative ribonuclease   KO K01147   exoribonuclease II [EC:3.1.13.1] Organism vpd  Variovorax paradoxus B4 Brite KEGG Orthology (KO) [BR:vpd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:vpd03016]     VAPA_1c09890 Enzymes [BR:vpd01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.13  Exoribonucleases producing 5'-phosphomonoesters     3.1.13.1  exoribonuclease II      VAPA_1c09890 Transfer RNA biogenesis [BR:vpd03016]  Prokaryotic type   3'processing and CCA adding factors    3'processing factors     VAPA_1c09890 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNB Motif Other DBs NCBI-ProteinID:  AGU48108 UniProt:  T1X6D1 LinkDB All DBs Position 1:complement(1089641..1091701) Genome browser AA seq 686 aa AA seqDB search MFVLFEEAGKYLGGRVLSEAEASAQVELDTGKRVKVKGANIVLRFEKPAPAELIGEARAL AATMDLDLAWEFASEGEFGFADLASDYFSDKPTLAQQAAALFALFEAPHYFRRAGKGRFK KAPAEILQQALAAIEKKKVVQAQIVEWAGQLGEGICPQPIREQLYKILFKPDKNAPEYKA VVDASRATQRPPLELLERAGAIDSPYQFHWRRFLFENFPKGTGFPALSAPAIVDDLPLAD DVQAFSIDDSQTTEIDDALSVQGLGSGTVTVGIHIAAPGLALTPGSAIDQVARARMSTVY MPGHKITMLPDDVVSTYTLLEGGDRPAVSLYARFDEATLELQSTETKLERVPIVANLRHD QLDAVVTQPWLEDAAFTNGDTPEAAAKLRAPLSFLFRLAKQLKAQREVVRGKPENFNRPD YNFRLVGNDGEPNGSEQVQITTRQRGAPLDLIVSEAMILANSSWGGWLGELGVPGLYRSQ ASLAPGIKVRMGTRALPHAGLGVKSYAWSTSPLRRYTDLVNQWQIIAAARHGKTAALAAP FKPKDADLFSILSGFDAAYATYNAYQGGMERFWTLKYLEQQGITELEATAIKDIPNGALV RADTLPLVFPVAGQQERGARLRVKLGEIDEIALDVHGTVLERLDAPKADVAAEEEGGDEE EEEVAGPIAIAVDLTDSEAAPENTPA NT seq 2061 nt NT seq  +upstreamnt  +downstreamnt atgtttgtattgtttgaagaagccggcaagtacctcggcggccgcgtgctgtcggaggcc gaagcatcggcgcaggtcgagctcgacaccggcaagcgcgtcaaggtcaagggcgccaac atcgttctgcgtttcgagaagccggccccggccgaactgatcggcgaggcgcgcgcgctc gcggccacgatggacctcgacctggcctgggagttcgcctcggagggcgagttcggtttt gccgatctcgcatccgactatttcagcgacaaacccacgctcgcgcagcaggccgccgcg ctgttcgcgcttttcgaggcgccgcactacttccgccgcgcgggcaaggggcgcttcaag aaggcgccggccgagatcctgcagcaggcgctggccgccatcgagaagaagaaggtggtc caggcgcagatcgtcgagtgggccggccagctgggcgagggcatctgtccgcagccgatc cgcgagcagctctacaagatcctgttcaagcccgacaagaacgcgcccgaatacaaggcc gtggtcgatgcctcgcgcgccacgcagcgccccccgctcgagctgctggagcgcgccggc gccatcgattcgccctaccagttccactggcggcgcttcctgttcgagaactttcccaag ggcacgggattcccggcgctctccgcgccggccatcgtggacgacctgccgctggctgac gacgtgcaggcgttctcgatcgacgactcgcagaccaccgaaatcgacgatgcgctttcg gtgcagggcttggggagcggcaccgtcaccgtaggcatccacattgccgcgcccggcctg gcgctgacgccgggcagcgccatcgaccaggtggcgcgcgcgcgcatgtccacggtctac atgccgggccacaagatcaccatgctgcccgacgatgtcgtgagcacctacacgctgctc gaaggcggcgaccgtccggcggtgtcgctctatgcgcgcttcgacgaggccacgctggag ctgcaatcgaccgagaccaaactcgaacgcgtgccgatcgtggccaacctgcggcacgac cagctcgacgcggtggtcacgcagccctggctcgaagacgccgcgttcacgaacggggac acgcccgaagccgctgcgaagctgcgcgcgccgctctccttcctgttccgcctcgcgaag cagctgaaggcccagcgcgaagtggtgcgcggcaagcccgagaacttcaaccggcccgac tacaacttccgcctcgtcggcaacgacggcgaaccgaacggcagcgagcaggtgcagatc accacgcgccagcgcggcgcgccgctcgacctgatcgtgtccgaagccatgatcctggcc aacagcagctggggcggctggctcggcgaactcggcgtgcccgggctctaccgcagccag gccagcctggcgcccggcatcaaggtgcgcatgggcacgcgggccctgccgcatgcgggc ctgggcgtgaagagctatgcctggagcacctcgccgctgcgccgctacaccgacctcgtg aaccagtggcagatcattgccgccgcgcgccacggcaagaccgccgcgctggcggcgccg ttcaagccgaaggatgcggacctgttctccattctctcgggcttcgacgccgcctacgca acgtataacgcctaccagggcggcatggagcgcttctggacgctcaagtacctggagcag caaggcatcaccgagctcgaggcgaccgccatcaaggacattccgaacggcgcactggtg cgcgcggacaccctgccgctggtgttcccggtggcgggccagcaggaacgcggcgcacgc ctgcgcgtgaagctcggtgagatcgacgaaatcgcgctcgacgtgcacggtaccgtgctc gaacgcctcgacgcgcccaaggcggatgtcgcggccgaggaggaaggcggcgacgaggaa gaggaagaagtcgccggccccatcgccattgcagtcgacctcaccgacagcgaggcggca ccggagaacacgcccgcatga

DBGET integrated database retrieval system