Variovorax paradoxus B4: VAPA_1c18710
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Entry
VAPA_1c18710 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c18710
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c18710
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AGU48979
UniProt:
T1X9H0
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All DBs
Position
1:complement(2005872..2006819)
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AA seq
315 aa
AA seq
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MDRGDLELVLAIRDQGSLAGASTTLDVVPSVVTKRLGALEARLGQRLFERTTRRLSVTAE
GEAVCLHAKTLLEGFSALESELGERQNELVGTIRLAATFGFGRRWLGPALASFQARHPGL
QIELLLTERLPDLGAEGYDGALWLWAVQQRRAADWVTRRIARNQRVLAASPAYIARRGLP
ATVDALRAHDCLVARENGEVNQRQFALWTLRHARDGSTARVRVQGPLTSNSGEMVRDWCL
AGHGIMLRSLWDIAPQLASGELVRVLPQFAMPDADIHWIAPWRPKTPRRVRLLLDHLAEQ
FRGEPWKPGKAASPR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcggcgatctcgaactggtactggccatccgcgaccagggaagcctcgccggc
gcatccaccaccctggatgtggtgccttccgtcgtgaccaagcggcttggcgcactcgag
gcacggctcggccagcgcctgttcgaacgcaccacgcgtcggctcagcgtgaccgccgag
ggcgaagccgtctgcctgcacgccaagacgctgctggaaggcttttcggccctcgaaagc
gaactcggcgagcggcagaacgagctggtcggcaccatccggctggcggcaactttcggt
ttcgggcggcgctggctcggccccgccctggccagctttcaggcgcgccatcccgggctg
cagatcgagttgctgctgaccgagcggctccccgatctcggcgccgaaggctacgacggc
gcgctgtggctctgggccgtgcagcaacgccgcgcggccgactgggtcacgcgccgcatc
gcgcgcaaccagcgtgtgcttgccgcctctcctgcatacatagcgcggcgcggcctgccg
gccacggtcgacgcgctgcgtgcgcacgactgcctggtggcgcgcgagaacggcgaggtc
aaccagcgccagttcgccctgtggaccctgcgccacgcgcgcgacggcagcacggcgcgc
gtgcgcgtccaggggccgttgacgagcaattcgggcgagatggtgcgcgactggtgcctg
gccgggcacggcatcatgctgcgcagcctctgggacattgcgccgcaactggcttccggc
gaactggtgcgcgtgctgccccagttcgccatgcccgatgccgacatccactggattgcg
ccctggcgccccaagacgccgcgccgcgtgcgactgctgctcgaccacctggcggaacag
tttcgcggcgagccctggaaaccgggcaaggccgcttcgccgcgctga
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