Variovorax paradoxus B4: VAPA_1c26250
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Entry
VAPA_1c26250 CDS
T02835
Name
(GenBank) putative branched-chain amino acid ABC transporter, permease protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c26250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c26250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c26250
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c26250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AGU49723
UniProt:
T1XAZ7
LinkDB
All DBs
Position
1:2784879..2786189
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AA seq
436 aa
AA seq
DB search
MTTTTTTTQYYRFKPWNIGRFLIWSLFAIVLIVSPLVFKSSLALTMLSQMGYLIIICLSY
NILLGQGGMLSFGHAVYVGLGSFLAIHVMNMGAKGGLQIPLVAIPLVGGLAGMFFAILLG
FVTTKKSGTTFAMITMGIGELVASMALMFPSFFGGEGGITTDRVYGPTFFGFNFGSQIQV
YYLIAAYCFVCTALMYAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAG
IGGGLASINFEIVNAADSLSAIRSGGYLLFTFLGGAVFFFGPIIGAVLLVFASILLSELS
KAWQLYFGLVFVFMVMFAPGGIASLVMMNLRVAKFGKFDRFWLLYIALAVALVPVVVGAA
ALIEMIYHIQLNAALGPNLNFFGVTLDTSGTASWLGAAAILTVGLAALEVARRRFVRVWG
QAQEEIEAEIKRREAA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacaaccacaaccacgcagtactaccgcttcaagccctggaacatcgggcgc
ttcctgatctggtcgctgttcgcgatcgtgctgatcgtttcgccactggtgttcaagagc
agcctggcgctcaccatgctctcgcagatgggctacctgatcatcatctgcctgagctac
aacatcctgctggggcagggcggcatgctgagcttcggccatgcggtgtatgtcgggctc
ggctccttccttgccatccacgtgatgaacatgggcgccaagggcggcttgcagattccg
ctcgtggccattcccctggtgggcggcctggccggcatgttcttcgccatcttgctgggc
ttcgtcacgacgaagaagtcgggcaccaccttcgcgatgatcaccatgggcatcggcgaa
ctggtggcctccatggcgctgatgttcccgagcttcttcggcggcgagggcggcatcacc
accgaccgggtctacggaccgaccttcttcggcttcaacttcggctcgcagatccaggtg
tactacctgatcgccgcgtattgcttcgtctgtaccgcgctcatgtatgccttcacgggc
acgccgctcggccgcatgctgaacgcggtgcgcgacaacccggagcgcgtggagttcatc
ggctacaacacgcagcgcgtgcgctacttcgcgttcatcattgccggcttcttcgcgggc
atcggtggcgggttggcgtcgatcaacttcgagatcgtgaacgcggccgacagcctgagc
gccatccgctcgggcggctacttgctgttcaccttcctgggcggggcggtgttcttcttc
gggccgatcatcggcgctgtgctgctggtgttcgcgtcgatcctgctgtcggagctctcg
aaggcctggcagctctacttcggcctggtgttcgtgttcatggtgatgttcgcgcccggc
ggcatcgccagcctggtgatgatgaacctgcgggtcgccaagttcggcaagttcgaccgc
ttctggctcctgtacatcgcgctggccgtggcgctggtgccggtggtggtgggcgctgcc
gcgctgatcgagatgatctatcacatccagctcaacgcggcgctcgggcccaacctgaac
ttcttcggcgtgacgctcgacacctcgggcacggcaagctggctcggcgccgctgcgatc
ctgaccgtgggcctggctgcgctcgaggtggcgcgccgccgcttcgtgcgtgtctggggc
caggcgcaggaagagatcgaagcagaaatcaaacgtcgggaggcggcgtaa
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