KEGG   Variovorax paradoxus B4: VAPA_1c33040
Entry
VAPA_1c33040      CDS       T02835                                 
Symbol
dnaE2
Name
(GenBank) error-prone DNA polymerase DnaE
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpd03400]
    VAPA_1c33040 (dnaE2)
Enzymes [BR:vpd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VAPA_1c33040 (dnaE2)
DNA repair and recombination proteins [BR:vpd03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VAPA_1c33040 (dnaE2)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon T2SSK DUF5039
Other DBs
NCBI-ProteinID: AGU50390
UniProt: T1XE19
LinkDB
Position
1:complement(3493435..3496830)
AA seq 1131 aa
MPDLSDKQLRGRNSAKVHALPQRARSSQELPGLPRLPDYAELHCLTNFSFQRGASTPEEM
VERAYQLGYTALAITDECSVAGIVRAHVCLRELPAKLDEYEREHPDEAQIPRNPGFRLLF
GSEFRFERFRLVVIANGTEGWGNLCEFITAARNTELPKGEYRVSWEDSDVASLQDCQVLF
VPHREPGGAVDAATLHEDLMAAKALYAGNLWLAVEMLNELDDDLWFVALMQAGEQAGVPL
VAAGDVHMHARSSKPLHDVLTAVREGKTVAACGFALQSNAERHLRQRLRLAELYLPRMLA
NTLVVAARCRFDPEVIRENYKYPLETVGTSETPAETLVRKTWEGALKKYPLERYASGIPA
NVCMQVHKELQLIIDLKYEMFFLTVEDIVRFAKSKEILCQGRGSSANSAVCYCLGITAID
PEKGHLLFERFLSRHRHEPPDIDVDFEHQRREEVIQYIYEKYGRDRAAIAAVVICYRSRS
ALRDVGKAMGIDERLIDEFAKDHYWFDDTVLGEQLFKAAARVDVEEDELKLVQWIEMTQR
LKGFPRHLSQHVGGFVLTHTRLTRLVPVEKASMKDRSVIQWEKDDLEAMGMLKVDVLALG
MLSAIRRGLDHMNRWRGGRVQMHHIPNDDQKVFDMICDADTIGVFQIESRAQMSMLPRLK
PRSYEDLVIEVAIVRPGPIQGGMVHPYLKQRERVAKGLAIHYEKEELKPALERTLGIPIF
QEQVMQIAMIAARFTADEADQLRRAMAAWKRKGGLEKFHHKLVKGMTDNGYKAEFAEAIF
KQILGFGDYGFPESHAASFALLVTVSSWLKNYEPACFLAALLDSQPMGFYSPSQLVQDAR
RHGVEVRPVDVACSDMDTTLEARAPDAPRMPAGTDARYADRLGNEDQPAVRLGLNRISSL
SKEGARRLLEARAQAPFTGTEDLALRAELDGKDMAALAAADALMSLSGHRRQQVWDATAT
RGMGDHSPALLKGVPINEQVLLLPAAPEGEEIVGDYAALGLTLRRHPLALLRSRLARMKL
MSAEQLRALPSGQTARACGIVKGRQRPGTANGTIFVTLEDETGNVNVIVWNHVIEAWREP
LLKSHLLAVQGTWQRDDDSGGKVQHLIATGFKDLTPLMGRLALSNTSRDFH
NT seq 3396 nt   +upstreamnt  +downstreamnt
atgcctgacctgagcgacaagcagctgcgcgggcgcaactcggccaaggtgcatgcactg
ccgcagcgggcgcggtccagccaggagctgccagggctgccgcgcctgccggactatgcc
gagctgcattgcctcaccaacttcagcttccagcgcggcgcctcgacgcccgaggagatg
gtcgagcgtgcctaccagctcggctacacggccctggccatcaccgacgagtgctcggtg
gcgggcatcgtgcgcgcgcacgtctgcctgcgcgaactgccggccaagctcgacgaatac
gagcgcgagcatcccgacgaagcgcagatcccgcgcaaccccggtttccggctgctgttc
ggcagcgagttccgcttcgagcgcttcaggctggtggtgatcgcgaacggcaccgagggc
tggggcaacctgtgcgagttcatcaccgccgcgcgcaacaccgagttgcccaagggcgaa
taccgcgtgagctgggaggacagcgacgtggcctcgctgcaggactgccaggttcttttc
gtgccgcaccgggagccgggcggcgccgtggacgcggccacgctgcatgaagacctgatg
gccgccaaggcgctctacgcagggaacctgtggctggccgtggaaatgctcaacgagctc
gacgacgacctctggttcgtcgcgctgatgcaggcgggcgagcaggcgggcgtgccgctg
gtggcggccggcgacgtgcacatgcatgcgcgttcgagcaagccgctgcacgacgtgctg
acggccgtgcgcgaaggcaagacggtggccgcgtgcggctttgcgctgcagtcgaatgcc
gagcggcatctgcggcagcggctgcggctggccgagctctatctgccccggatgctcgcg
aacacgctggtggtggccgcacgctgccggttcgatccggaggtgatccgcgagaactac
aagtacccgctcgaaaccgtgggaaccagcgagacgccggccgagacgctggtgcgcaag
acgtgggagggcgcgctcaaaaagtacccgcttgaaagatatgcctcgggcattcccgcg
aacgtttgcatgcaggtgcataaagagctgcaattaatcattgatctcaaatacgagatg
ttcttcctgaccgtggaggacatcgtgcgttttgccaagtcgaaggagatcctttgccaa
ggccgcggctcctcggccaattcagcggtctgctattgcctcggaattaccgcgatcgac
cctgaaaaaggccacctgctgttcgagcgcttcctgagccgccatcgccacgagccgccc
gacatcgacgtcgacttcgagcaccagcggcgcgaagaagtcatccagtacatctacgag
aaatacggccgcgatcgcgcggccatcgcggccgtcgtcatctgctaccgctcacgcagc
gccttgcgcgacgtgggcaaggccatgggcatcgacgaacggttgatcgacgaattcgcc
aaggaccactactggttcgacgacaccgtgctgggcgagcagttgttcaaggcggccgcg
cgcgtcgacgtggaggaagacgagctcaagctggtgcaatggatcgagatgacgcagcgg
ctcaagggctttccgcgccacctgagccagcatgtgggtggcttcgtgctcacgcacacc
aggctcacgcggctggtgccggtcgagaaggcgtccatgaaagatcgctccgtcatccag
tgggagaaagacgacctcgaagccatgggcatgctcaaggtcgacgtgctcgcgctcggc
atgctcagcgcgatacggcgcgggctcgaccatatgaaccgctggcgcggcgggagggtg
cagatgcaccacatccccaacgacgaccagaaggtgttcgacatgatctgcgacgccgac
accatcggcgtgttccagatcgagagccgggcgcagatgtcgatgctgccccgcctgaag
ccgcgcagctacgaagacctggtgatcgaggtcgcgatcgtgcggcccgggcccatccag
ggcggcatggtgcatccctatctcaagcagcgcgagcgggtggccaagggcctggcgatc
cattacgagaaggaagaactgaagcccgcgctggagcgcacgctgggcattccgatcttc
caggagcaggtgatgcagatcgcgatgatcgcggccaggttcacggccgacgaggccgac
cagctgcgacgcgccatggcggcatggaagcgcaagggcggcctcgagaagttccaccac
aagctcgtgaagggcatgaccgacaacggctacaaggccgagttcgccgaggccatcttc
aagcagatcctcggcttcggcgactacggctttcccgaaagccacgccgcgagctttgcc
ttgctggttaccgtgagcagctggctcaagaactacgagccggcctgcttccttgcggcg
ctgctcgactcgcagcccatgggcttctacagcccctcgcagctggtgcaggatgcgcgg
cggcatggcgtcgaggtgcggccggtcgatgtcgcgtgcagcgacatggacaccacgctc
gaagcacgcgcccccgatgcgccacgcatgcctgcgggcaccgatgcgcgctacgccgat
cgcctcggcaacgaggaccagcccgcggtgcggctcggcctgaaccgcatttcaagcctc
agcaaggagggcgccaggcgcctgctcgaagcgcgcgcgcaagcacccttcaccggcacc
gaagacctcgcgctgcgcgccgagctcgacggcaaggacatggcggcgctggccgcggcc
gatgcgctgatgtcgctctcgggccaccgtcgccagcaggtgtgggacgccaccgccacc
cgcggcatgggtgaccactcgccggccttgctcaagggcgtgccgatcaatgagcaggtc
ctgctgctgcccgcggcgcccgagggcgaggagatcgtcggcgactacgcagcgctcggc
ctcacgctgcgccgccatccgcttgcgctgctgcgctcgcgcctggcgcgcatgaagctc
atgagcgcggagcagctgcgcgcgctgcccagcggccagaccgcgcgtgcctgcggcatc
gtcaagggccgccagcgcccgggaaccgccaacggcaccatcttcgtcacgctcgaggac
gagaccggcaacgtcaacgtcatcgtctggaaccatgtcatcgaggcctggcgcgagccg
ctcctgaagtcgcacctgctcgcggtgcagggcacctggcagcgcgacgacgacagcggc
ggcaaggtgcagcacctgatcgccaccggcttcaaggacctgacgccgctcatgggccgg
ctggcgctgagcaacaccagccgcgacttccattga

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