Variovorax paradoxus B4: VAPA_1c35510
Help
Entry
VAPA_1c35510 CDS
T02835
Symbol
kdsA2
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase KdsA
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00540
Lipopolysaccharide biosynthesis
vpd01100
Metabolic pathways
vpd01250
Biosynthesis of nucleotide sugars
Module
vpd_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VAPA_1c35510 (kdsA2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
VAPA_1c35510 (kdsA2)
Enzymes [BR:
vpd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VAPA_1c35510 (kdsA2)
Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
Lipid A
VAPA_1c35510 (kdsA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGU50635
UniProt:
T1XEV5
LinkDB
All DBs
Position
1:3753110..3753967
Genome browser
AA seq
285 aa
AA seq
DB search
MKLCGFDIGLDQPFFLIAGPCVVESEQLQMDTAGTLKEITSSLGIPFIFKSSFDKANRSS
GTSFRGPGREKGLEILAKVKRELGLPVLTDVHTEDDIAEAAKVVDVLQTPAFLCRQTDFI
RAVAQSGKPVNIKKGQFLAPHDMKNVIDKARAAAKEAGLPEDSFMACERGASFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREMVPVLSRAAVAVGVAGLFMETH
PDPAKALSDGPNAVPLKHMKALLETLLALDQVTKKNAFLEDVFQS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgcggattcgacatcgggctcgaccagcccttcttcctgattgccggcccc
tgcgttgtcgaatccgagcaattgcagatggacacggctggcacgctgaaggaaatcact
tcctcgctcggcattccgttcatcttcaagagcagcttcgacaaggccaaccgctcctcg
ggcaccagctttcgcggcccgggccgcgagaagggcctggagatcctggccaaggtgaag
cgcgaactcggcctgcccgtactgaccgacgttcataccgaggatgacatcgccgaggcc
gccaaggtggtcgacgtgctgcagacgcccgccttcctgtgccgccagaccgacttcatc
cgcgcggtggcgcagtcgggcaagccggtgaacatcaagaagggccagttcctcgcaccg
cacgacatgaagaacgtgatcgacaaggcgcgcgctgccgccaaggaagccggcctgccc
gaagacagcttcatggcctgcgagcgcggcgcgagctttggctacaacaacctggtgtcg
gacatgcgttcgctcgcgatcatgcgcgagaccggcgcacccgtggtgttcgacgccacc
cactcggtgcaactgccgggcggccagggcacgagctcgggcggccagcgcgaaatggtg
ccggtgctctcgcgcgcggccgtggccgtgggcgtggccggcctcttcatggaaacgcac
cccgatcccgccaaggcactgagcgacggccccaatgccgtgccgctcaagcacatgaag
gccctgctcgaaacgctgctcgcgctcgaccaggtgaccaagaaaaacgcatttctggag
gacgtctttcaatcatga
DBGET
integrated database retrieval system
