Variovorax paradoxus EPS: Varpa_2636
Help
Entry
Varpa_2636 CDS
T01392
Name
(GenBank) Amidase
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_2636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_2636
Enzymes [BR:
vpe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
Varpa_2636
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
Varpa_2636
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Varpa_2636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
ADU36835
UniProt:
E6V1S9
LinkDB
All DBs
Position
2851148..2852614
Genome browser
AA seq
488 aa
AA seq
DB search
MYFDVKVQKINEDPGTMQKAVTVKALAAAYEQRHITPTEVAEQCLARAEETRGVFTQITA
AHARAQAEQSTARWRAGAPLGPLDGVPLTWKDLFDIEGTPTTAGSGLLAHAAPAEADATL
VAHAEAAGMVCIGKTNLSEFAYSGLGLNQAFGTPVNPALGVRARAPGGSSSGAALAVALD
VAPIGIGTDTAGSVRVPAAFNGLIGYRASRHRYAMTGVFALAPSLDTVGPLARSVEDCIL
MDAVLQGGRGNEGREAFAGTVDEARRLLAQQTFVVDPRILESDGVSAAVRNNLLAQMQQL
REAGAAVEHRALSSLHRTQALVDSHGWLGAYEAFAMHQARLDGPQAKDMDPRVRRRLEAA
RHFTAAGYLHLRWERPLLMSLFERELGGATLVLPTTAHTAPLLQPLQDDDALFASTNLAT
LRLTMPGSFLDTPALSMPSGFERVRAPDATTDALPTGMQLMRPRGDDLRLLQIAFALEQV
FSSTNFKE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgatgtcaaagtacaaaaaatcaatgaagatcccggcaccatgcaaaaagcg
gtgacagtgaaggccttggcagcggcgtacgagcagcgccacatcacgccgacggaggtc
gccgagcagtgcttggcgcgcgccgaagaaacgcgtggcgtgttcacgcagatcaccgct
gcgcacgcacgggcgcaagcggagcaatcgactgcgcggtggcgggctggcgcgccgctc
ggtccgctggatggcgtgcccctgacctggaaggacctgttcgacatcgagggcacgccc
accacggcgggatccgggctgctcgcgcatgcagcgccggccgaggcggacgcaacgctc
gtggcccatgccgaggctgccggcatggtctgcataggcaagaccaacctgagcgagttc
gcctattcggggttggggctgaaccaggctttcggcacgccggtcaacccggctctcggg
gtgcgcgcgcgggcgccgggcggctcttcctcgggtgcggcgctggcggttgcgctcgat
gtggcgccgatcggcatcggaaccgacacggccggctcggtgcgagttccggctgccttc
aacggtttgatcggctatcgggccagcaggcatcgttacgcgatgacgggcgtgttcgcg
ctcgcgccctcgttggacaccgtcggccctctcgcacgctcggtcgaagattgcatcctc
atggacgcggtgctccagggcgggcgcgggaacgaagggcgcgaggcgttcgccggcact
gtcgatgaagcccggcgtctcctcgcacagcagaccttcgtggtcgacccgcgaatcctg
gagagcgacggcgtcagcgccgcggtgcgcaacaacctgctggcgcagatgcagcagctt
cgcgaagcgggcgcggcggtcgagcacagggcgctttccagcctgcaccggacgcaagcc
ctggtcgacagccacggctggctcggtgcctatgaagcattcgccatgcatcaagcacgg
ctcgacggaccgcaggcaaaagacatggatccgcgcgtgcgccgccgtctcgaagcggcg
cgccatttcaccgccgccggctatctgcacctgcgctgggagcggccgctcttgatgtcg
ctgttcgagcgcgaactgggcggcgcgaccctggtgcttcccaccaccgcgcacaccgca
ccgctgctgcaaccgctgcaggacgacgacgcgctcttcgccagcaccaacctcgcgacg
ctgcgcctgacgatgcctggcagctttctcgacacgcccgcgctgtcgatgcccagcggc
ttcgagcgcgtgcgcgcacccgatgccaccaccgacgcgctccccaccggcatgcagctg
atgcgtccgcggggagacgacctgcggcttctgcagattgcttttgcgctggagcaagtg
ttttcctcaaccaacttcaaggagtga
DBGET
integrated database retrieval system