Vibrio parahaemolyticus UCM-V493: VPUCM_0179
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Entry
VPUCM_0179 CDS
T03116
Name
(GenBank) Ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_0179
Enzymes [BR:
vph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
VPUCM_0179
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VPUCM_0179
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AHI98137
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All DBs
Position
1:197380..198096
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AA seq
238 aa
AA seq
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MRPNDRKADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT
AEYGMLPRATHSRTRREAANGKQGGRTMEIQRLIARSLRAVVDLQAMGEFMITVDCDVIQ
ADGGTRTASISGASVAMADAFQHLVDSGKLKANPMKGHVAAVSVGLLGDEVLCDLEYVED
SAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLMALLESAKVGITEIVAAQKAALAN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaaacgatcgcaaggcggaccaagttcgcccaatcaaaattactcgtaactac
acggcttacgctgaaggttcagtgttagttgagttcggtaacaccaaagtgttgtgtaat
gcgaccgtcgaagaatcagtgccacgttggttaaaaggccaaggtaaaggctgggtgacc
gctgaatacggcatgctacctcgtgcgactcactcgcgtactcgccgtgaagcggcaaac
ggtaagcagggtggccgtacaatggaaatccaacgccttatcgcgcgtagcctacgtgca
gttgtcgatttgcaagctatgggcgaattcatgatcacggttgactgtgatgtaattcaa
gctgacggcggcacacgtactgcatcaatcagtggtgcaagcgttgcaatggcagatgca
ttccaacatctagtcgatagtggcaagctaaaagcaaacccaatgaaaggccacgtagcg
gcagtatcagttggtttgcttggtgatgaagtgctgtgtgaccttgagtacgttgaagat
tcagcagcagataccgacatgaacgttgtgatgacagaagaaggtaagatgattgagatt
cagggcaccgcagaaggtgaaccgttcagtcatgaacagctgatggcattactcgagtcg
gcgaaagtcggcattacggaaatcgtcgcggcgcagaaggcggcgctagccaattga
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