Vibrio parahaemolyticus UCM-V493: VPUCM_0915
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Entry
VPUCM_0915 CDS
T03116
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_0915
Enzymes [BR:
vph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
VPUCM_0915
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VPUCM_0915
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHI98873
LinkDB
All DBs
Position
1:997660..998427
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AA seq
255 aa
AA seq
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MSEQETSQTVAPVELEIVYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHV
FPLHRLDRPTSGVLVFALSSEVASQVMPMFAEHKMEKTYHAIVRGWIEEEGVLDYALKVE
LDKIADKFASQEKEAQEAVTAYKPLAKVEVPYSTGKFPTTRYCLMEMKPKTGRKHQLRRH
MAHLRHPIVGDTSHGDGKHNKLFRNEFDSHRLLLHASELRFVHPFTNEELVMKASIDDTW
QQLFTRFEWDEELVK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagaaacatcacaaaccgtggctccagtagagttggagattgtttatcaa
gatgagtattttgttgcggtgaacaagcccgccggcatgttggttcatcgcagttggcta
gataaacacgaaactcagtttgtcatgcagactctgcgagaccaaattggtcagcatgtc
tttccgttgcatcgcttggatcgtccgacttctggcgttttggtgtttgcgctctccagt
gaagtggcttctcaagtgatgcctatgtttgctgagcacaaaatggagaagacctatcac
gcgattgtccgtggttggattgaggaagagggcgttttagattacgcgttaaaagtcgaa
ttagacaaaattgcagataagttcgcctcacaagaaaaagaagctcaagaggccgtaacc
gcttacaaaccactggcgaaagtggaagtgccttattcgacgggcaagttcccaacaacg
cgctactgtttgatggaaatgaagcccaagactggtcgcaagcaccaattgcgtcgtcac
atggcccacctacgtcacccaattgtgggggacacatcgcacggtgatggtaaacacaac
aaattgttccgtaacgaatttgattcacaccgcttgctgttacatgcttcggagctgcgt
tttgtgcatccgtttacaaatgaagagctggtgatgaaagcgagtatcgacgatacgtgg
cagcaattgtttactcgatttgagtgggacgaagagctcgttaagtaa
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