KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_0966
Entry
VPUCM_0966        CDS       T03116                                 
Name
(GenBank) DinG family ATP-dependent helicase YoaA
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vph03400]
    VPUCM_0966
Enzymes [BR:vph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VPUCM_0966
DNA repair and recombination proteins [BR:vph03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VPUCM_0966
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C T4SS-DNA_transf SLFN-g3_helicase UvrD-helicase
Other DBs
NCBI-ProteinID: AHI98924
LinkDB
Position
1:1054581..1056500
AA seq 639 aa
MSGMIAKTFSSDGALGKAIPGFQARQPQIDMAEAVSSAIKEQSQLVVEAGTGTGKTFAYL
VPALLSGKKVIISTGSKNLQEQLYHRDLPLMVNALGFYGQVALLKGRSNYLCLDRLSRQM
VASHTNESDPTLLTQLVKVRSWSSETKTGDLGDCEDLPEDSMIIPTITSTNDNCLGKECP
SYTDCFVLKARKRAMDSDIVVVNHHLFLADLAIKETGFGELIPEADVFIFDEAHQLPDIA
SEYFGQSVSSRQIHDLAKDIEIAYRTEAKDMRQLQKVGDKLLQSAMDMRIVLGEPGFRGN
WREAMQSESIKRELVRLTDSLDLAIDVLKLALGRSQLLDTAFERANLIKGRIERVCDVDI
TGYSYWYDTSPRHFTLHITPLSVADKFHEQIEIKQGAWIFTSATLAVSGDFKHFTDRLGL
KPKQQFSLPSPFDYEKQARLCVPRYLPEPNSPGLADKLVRMLAPVIEENDGRCFFLCTSH
SMMRELGEKFREVLDLPVLMQGEMSKQKTLAEFMELGNALLVATGAFWEGIDVRGDALSC
VIIDKLPFTAPDDPLLKARIEDCRLRGGEPFAEVQIPDAVITLKQGVGRLIRDQKDHGAL
IICDNRLVTRDYGGTFLGSLPPIPRTRDLERIKAFLKAE
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgtcaggcatgatcgcaaaaacattttcctctgatggcgctttaggtaaagcgattccg
ggttttcaggctcgtcagccacaaatagacatggctgaagccgtcagtagtgcgatcaaa
gaacaaagtcagttggtggtagaggcgggaactggtaccggtaaaacatttgcctatctt
gtcccagcgctgttgagtgggaagaaagtcatcatcagtactggctcgaaaaacttgcaa
gagcagttgtaccatcgtgacctaccgctgatggtcaatgcgctcggtttttatggtcaa
gtggcgttattgaaagggcgttccaactatttatgtttggatcgtttaagtcgccagatg
gtagcaagccacaccaacgaatctgacccaacattgttgactcaattggtgaaggtgagg
tcttggtcttcagagacaaaaaccggtgacttaggtgattgtgaagatttgcctgaagac
agcatgatcatcccaacgattacctcgacaaacgataactgtttggggaaagagtgtccc
agctataccgattgctttgtcttgaaagctcgtaaacgtgcaatggattctgacatcgtc
gtggtgaaccatcacttgtttctcgcggatttagccatcaaagagacaggttttggtgag
ttgatcccagaagccgatgtctttattttcgacgaagctcatcagctaccagacattgcc
agtgaatatttcgggcaatcggtatcgagtcgccaaattcatgatctcgccaaagacatt
gaaatcgcgtatcgcaccgaagcaaaggacatgcgtcagctgcaaaaagttggggataaa
ctgcttcaaagcgcgatggatatgcgcatcgttttgggtgagcctggttttcgtggcaac
tggcgagaagcgatgcagtctgaatccattaagcgcgaattggttcgtttaactgacagc
ctagatctggcgattgatgtgctcaaattggcacttggtcgcagccaattgttggatacg
gcttttgagcgtgcgaacttgatcaaaggtcggatcgagcgtgtgtgtgatgttgacatc
accggctactcttactggtacgatacgtcaccgcgtcattttactctgcatattactccg
ttatcggtggcagataagttccatgaacaaatagaaatcaagcaaggtgcgtggatcttc
acctcggcaacgcttgcggtttctggtgactttaagcactttaccgatcgtctcggctta
aaacctaaacaacagttttcgctgccatcgccatttgattatgaaaagcaggctcgcctt
tgtgtgcctcgttatcttcctgagccaaacagcccaggcttagcggacaaattggtgaga
atgttagcgccagtcattgaagaaaatgacggtcgttgtttcttcttatgtacttctcac
agcatgatgcgtgagttgggagagaagttccgtgaggtgttggatcttccggttcttatg
caaggtgaaatgagcaagcaaaagactcttgcagagtttatggagctgggtaacgctttg
cttgtggcgacgggggcgttttgggaagggatcgatgttagaggtgacgcactgagctgt
gttatcatcgacaaattgccgtttactgccccggatgatccgctgctaaaagcccgaatt
gaagattgtcgattgcgtggtggtgagccgtttgctgaagtgcaaatccccgatgcggtg
atcactttaaagcagggcgtagggcgtttgattcgagatcagaaagatcatggtgcattg
atcatttgtgacaatcgccttgtcacccgtgactatggcggcacgttccttggaagctta
cctcctatcccaagaacacgagatttagaacgtatcaaagcgtttcttaaagcagaataa

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