Vibrio parahaemolyticus UCM-V493: VPUCM_20791
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Entry
VPUCM_20791 CDS
T03116
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00470
D-Amino acid metabolism
vph00550
Peptidoglycan biosynthesis
vph01100
Metabolic pathways
vph01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VPUCM_20791
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPUCM_20791
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VPUCM_20791
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
VPUCM_20791
Enzymes [BR:
vph01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VPUCM_20791
Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
Precursor biosynthesis
Amino acid ligase
VPUCM_20791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
Peptidase_M55
Motif
Other DBs
NCBI-ProteinID:
AHJ01912
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All DBs
Position
2:845942..846931
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AA seq
329 aa
AA seq
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MIKNILLLCGGGSSEHEISLLSANFVEQQLNLIQNVKVTRVEIKNEGWVTNQGELVYLDL
NTKQLCSNESNQTIDFIVPCIHGFPGETGDIQSLFEIAGIPYLGCGPEASSNSFNKITSK
LWYDALDIPNTPYLFLTRNDEHAHRQAEQAFEKWGKVFVKAARQGSSVGCYSVTEKQAIA
KAVNDAFGYSDQVLVEKAVKPRELEVAAYEMNGELHITKPGEVIAPDGAFYSYDEKYSSS
SHSLTEVEAKNLTQEQIDKIRHASETVFKQMNLRHLSRIDFFLTEDNEIYLNEVNTFPGM
TPISMFPKMLQNNGHKFHEFLEDCINSAK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatattcttctattatgcggcggcggctcttctgaacacgaaatttcactg
ttgtcggctaactttgttgaacaacaactaaacctaattcagaacgtcaaagtcactcgc
gtagaaataaaaaatgaaggttgggtcacaaatcaaggcgaattggtttaccttgattta
aacaccaaacaattgtgctcgaatgaatccaatcaaacgatcgactttattgtgccttgt
attcacggctttcctggcgagactggtgacattcaatcactattcgaaattgccggtatt
ccatacttaggatgtggaccagaagcaagcagcaacagtttcaataaaatcacatcaaaa
ctttggtacgacgctttagacattccaaatacaccttacttattcctaactcgcaatgat
gaacacgctcacagacaagctgaacaagcctttgaaaagtggggaaaagtgtttgttaaa
gctgcacgtcagggctcgtctgttgggtgttacagtgtaaccgagaagcaagctatcgct
aaagcagtaaacgatgcgtttggttattcagatcaagtacttgtagagaaagcggtaaaa
cctcgtgagttagaagtcgcagcttatgaaatgaacggtgaactgcacatcactaagcca
ggtgaagtgatcgcacccgatggtgcattttactcatacgatgaaaaatacagcagctca
agccattcattaacagaagtagaagcgaagaacctgactcaagaacagatcgataagatt
cgtcatgcgtcagaaaccgtattcaaacaaatgaaccttcgtcatttgtctcgcatcgac
tttttccttacggaagataacgaaatttacttgaatgaagtgaatacattcccaggaatg
acaccaatttcaatgttccctaaaatgcttcaaaacaatggtcacaagttccatgagttt
cttgaagattgtattaatagtgcaaagtga
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