Virgibacillus pantothenticus: KBP50_20090
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Entry
KBP50_20090 CDS
T07430
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KBP50_20090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpt03400
]
KBP50_20090
DNA repair and recombination proteins [BR:
vpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KBP50_20090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
STAT_int
Rad50_zn_hook
SpmSyn_N
DZR
Motif
Other DBs
NCBI-ProteinID:
QTY16089
LinkDB
All DBs
Position
complement(4331957..4332808)
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AA seq
283 aa
AA seq
DB search
MHTMWKGTISFGLVNIPVKMHAATENKDIQLRQLHKECQSPIKYERTCPVCERPVKNEEI
VKAYEYAKNKFVVLDEEELEALKQEQADKAVEIVDFVQLAEVDPIYYEKSYFLSPNEGGA
KAYGLLRKALKETEKIGIAKMMIRSKEQLAIIRVYQDTLVVETIHYPDEVRSVADVPNVP
KEVEANSQELDTAKMLIEQLTTAFDPTKYKDEYRHALLDLIEQKKEQDQTATALDKPSPD
AATNLMDALQASLERAKQDKPKPKQPQLSKQKEKKVKKKKTGT
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaaaggaacgatcagctttggtcttgtgaacatccctgtaaaaatg
catgccgctactgagaataaagatattcaattaaggcaattgcataaggaatgtcaatca
cctattaaatatgagcgtacgtgtcctgtatgtgaacgcccagttaaaaacgaagaaatt
gtcaaagcatatgagtacgcaaagaataaattcgttgttttggacgaagaagagctggaa
gcattaaaacaggaacaagcagataaggctgtagaaattgttgattttgtacaacttgct
gaggttgaccccatttattatgaaaaaagctactttttatctccaaatgaaggtggcgct
aaagcttacggcctattgcgtaaagcattgaaggaaaccgagaaaattggtattgccaaa
atgatgattcgctctaaagaacaattagcaatcattcgtgtttatcaggatacattagtt
gtcgaaacgatacactatccagatgaagtacgtagtgttgcagatgtacctaatgttcct
aaagaggtggaggcaaactcccaagaattggatacggcaaagatgctgatcgaacaatta
acgacagcttttgatccgacaaagtataaggatgagtacagacatgctttgcttgattta
attgagcaaaagaaggagcaagatcaaacggctactgcgctggataagccttcaccagat
gcagcaacaaatttgatggatgctttacaagcttcattagaacgagcaaagcaggataag
ccgaaaccaaaacagccacagctatccaaacaaaaggaaaaaaaggtaaaaaagaagaaa
acagggacataa
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