Vibrio qinghaiensis: CCZ37_12135
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Entry
CCZ37_12135 CDS
T05259
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CCZ37_12135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vqi03000
]
CCZ37_12135
03036 Chromosome and associated proteins [BR:
vqi03036
]
CCZ37_12135
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_12135
Transcription factors [BR:
vqi03000
]
Prokaryotic type
Helix-turn-helix
Other families
CCZ37_12135
Chromosome and associated proteins [BR:
vqi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CCZ37_12135
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CCZ37_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_30
Xre-like-HTH
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASU23290
UniProt:
A0A223N0J2
LinkDB
All DBs
Position
1:2612996..2613292
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AA seq
98 aa
AA seq
DB search
MFEQNLTSEAFTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaacctgacttcagaagctttcacagtaacaaccgtaacttcacaagat
caaatcacgcaaaaaccactacgtgattcagttaaagcatctcttaaaaactaccttgcg
cagttaaacggccaagaagtgacagaactatacgagttagttcttgctgaagttgaacag
ccactactcgacaccatcatgcagtacactcgcggtaaccaaactcgcgcagcaaccatg
atgggtatcaaccgcggtactcttcgtaagaagctaaaaaaatacggcatgaactaa
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