KEGG   Vibrio ruber: RND59_20070
Entry
RND59_20070       CDS       T09542                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
vru  Vibrio ruber
Pathway
vru00470  D-Amino acid metabolism
vru00550  Peptidoglycan biosynthesis
vru01100  Metabolic pathways
vru01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:vru00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RND59_20070
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RND59_20070
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RND59_20070
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vru01011]
    RND59_20070
Enzymes [BR:vru01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RND59_20070
Peptidoglycan biosynthesis and degradation proteins [BR:vru01011]
 Precursor biosynthesis
  Amino acid ligase
   RND59_20070
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATPgrasp_ST CPSase_L_D2
Other DBs
NCBI-ProteinID: WNJ97496
LinkDB
Position
2:984342..985358
AA seq 338 aa
MGRINILLLCGGGSSEHEVSLVSANYVQEQLQTNPHFHVERVEMKSDGWFTEDGHLAYLD
TNTATLNTDVSRQKIDFVVPCIHGYPGETGDIQSMLELAAIPYLGCGPEASSNSFNKITS
KLWYDALSVPNTPYLFLSEFTDEAIAQCEAAFHRWGALFVKAARQGSSVGCYKVTDLSQL
RQSITSAFQFSEQVLVEKAVKPRELEVAAYEIGGELYISAPGEVIAPADAFYTYEEKYSN
TSHSHTKVEAEGLTVKQLTSIREYSEKIFRHMKLRHLARIDFFLTPDGEVYLNEVNTFPG
MTPISMFPKMLENNGHSMADFLTDCIERSLAKIRASKA
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggccgtatcaatatattgttgctttgtggtggtggttcatctgaacatgaggtgtca
ttagtttctgcaaattatgttcaggagcagctccaaaccaatcctcattttcatgttgaa
cgggttgaaatgaaaagtgacggatggtttaccgaagacggtcatctggcatatttggat
accaacacagcaacgctgaataccgacgtcagtcgtcagaaaattgattttgtggtgcca
tgtattcatggctatcccggagagaccggtgatattcagtcaatgcttgaattagctgcg
attccatatctgggatgtggtccggaagcgagctcaaatagttttaataagatcacctca
aaactttggtatgatgcgctaagcgtcccgaataccccttatttatttctgtctgaattc
acggatgaggcaatcgcccagtgcgaagccgcttttcatcgttggggagctttatttgta
aaagctgccagacagggttcttcggttggatgttacaaggtcactgatttatcgcaatta
cgtcagtcgataacctcggcatttcagttttctgagcaggttcttgtcgaaaaagcggta
aaaccacgtgagctggaagttgcggcttatgaaattggcggagaactttatatttcagct
ccgggtgaagtgattgcaccagcggatgcattttatacctatgaagagaaatatagtaat
accagccactctcataccaaagttgaggccgaaggtcttactgtcaaacagctcacctca
attcgtgaatatagcgaaaaaatatttcgtcatatgaaactcagacaccttgcccgcatt
gattttttcctgactcctgacggagaagtctatttgaatgaagtgaatacattcccgggg
atgacgccgatctcgatgttcccgaaaatgttagagaataatggccatagcatggctgat
tttttaacggattgtattgagcgttcattggcaaaaatcagggcttccaaggcttaa

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