Aliivibrio salmonicida: VSAL_p840_66
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Entry
VSAL_p840_66 CDS
T00782
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
vsa
Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:
vsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsa03032
]
VSAL_p840_66 (hupA)
03036 Chromosome and associated proteins [BR:
vsa03036
]
VSAL_p840_66 (hupA)
03400 DNA repair and recombination proteins [BR:
vsa03400
]
VSAL_p840_66 (hupA)
DNA replication proteins [BR:
vsa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VSAL_p840_66 (hupA)
Chromosome and associated proteins [BR:
vsa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VSAL_p840_66 (hupA)
DNA repair and recombination proteins [BR:
vsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VSAL_p840_66 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAQ81925
UniProt:
B6ET37
LinkDB
All DBs
Position
pVSAL840:complement(77075..77350)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKKELVWHIAESADLSQQRATATLNATVDIITTALKEGDDVALVGFGTFKVNPRAAREG
RNPKTGDMIQIAASNALVFKAGKALKETLNP
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaattagtatggcacattgctgagtctgcggatttatcacaacaaaga
gctacggccacattaaatgcgaccgttgacattattactacggcattaaaagaaggtgat
gacgtcgccttggttggatttgggaccttcaaagtcaaccctcgagcagctcgcgaaggt
cgaaaccctaaaacgggggatatgatccagattgcggccagtaatgcactggtatttaaa
gctgggaaggcgttaaaagagactctaaacccataa
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