Vibrio scophthalmi: VSVS12_03375
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Entry
VSVS12_03375 CDS
T04650
Name
(GenBank) putative signaling protein
Organism
vsc
Vibrio scophthalmi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
PAS_4
HAMP
PAS_9
PAS_8
CofB_pilin_dom
Motif
Other DBs
NCBI-ProteinID:
ANS87084
UniProt:
A0A1B1NUA5
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Position
2:complement(356774..358717)
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AA seq
647 aa
AA seq
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MITTLMAGLPLRYKMILPTWLMVTFIIGGIGALAIQFNVSSQKVNLDHRISVLTQAVANT
LPAALTFDDSLSAQEQLNNLTFDPDIIAAQVLNSEHQGFIDIQRIPRGCAWNKGVVQCQS
KEFEVHTTPISLGGEQLGTLKVWVSLEYLKAMANKLWTSLLIITLSLSVLAWLFARSLHR
LIITPLSALHHSMEKMTRDGVLKKELPVLHDDELGKLTACFNEMVSSLREREFQLHSALD
SVEQKNRYIYRALDVMKRGIMVVSPGNTITYHNPAAAKELKDIEHVNNTRCVLERYFEPR
SAIEEVLAAIDNQQPLHAIEMRAIQTQRHYQVSCHPMDENKHVLLQLEDITARHLAEHRR
KLVELMFEQNQDAVLVVSRNFKVEMQNQQSHQWFGPLDSLYDLAFDNKFNNLKQLKTLLK
NGRLSLETKVRCKTDWLPCQLTVRSLRNAKGKVEALVFTLIDQSVELELKRLNYVANHDQ
LTGLANRANAVHRLQESHNNGESQMVCFIDLDGFKAINDEHGHAVGDQLLCMVGKRLTSC
LAQEDIVSRLAGDEFLLGINGMCSSPSIFNRVVEKLSTPFMIDGVACQVTASLGISYWPA
TDTTSLDQKITEADEAMYIAKRQGKNQFYCLDHIHARSNETEVGQSA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattacgacattaatggcaggtctcccgctacgctacaaaatgatcttaccaacatgg
ttaatggtgacctttattattggcggcatcggtgcgctcgccattcaatttaacgtcagt
tcgcaaaaagtgaatctcgatcatcgtatcagcgtgctcacccaagcggtggcaaatacc
ttgccagcggcgctgacctttgatgactctttatctgcacaagagcaactgaacaacctg
acctttgatcccgatatcatcgccgctcaagttcttaacagtgagcaccaaggatttatc
gacattcaacgcatacctcgtggctgtgcgtggaacaagggcgtagtgcaatgccaaagc
aaagagtttgaagtgcacacgacaccaatctcgttaggcggagagcagctaggtacacta
aaagtttgggtatcgctcgagtacctcaaggcaatggcaaacaaactgtggacctcattg
ctaatcattacactttctctctccgttttggcatggttatttgcacgctcactgcatcgt
ttaatcatcacgccgctgagtgctttacaccattcaatggaaaaaatgactcgcgatggg
gtgctgaaaaaagaactgccggtgttgcatgacgatgagttaggcaaactcacggcttgt
tttaacgaaatggtcagcagcctgcgcgagcgtgaattccaattgcattcagcactggat
agcgttgagcaaaaaaaccgctacatctatcgtgcacttgatgtaatgaaacgtggcatc
atggtggtttctccggggaacaccatcacttatcacaatcctgcggccgcaaaagagcta
aaagacatcgagcatgtcaataatactcgttgtgtgttggagcgttattttgagccacgc
agcgccattgaagaagtattagcggctatcgacaatcaacagccactgcatgccatcgaa
atgcgggcaattcaaactcaacgtcactaccaggttagttgccatccgatggacgaaaat
aagcacgtattgctacaactggaagatattactgcgcgccatcttgcagaacatcgccgt
aaactggttgagctgatgtttgaacaaaaccaagatgccgtattagtggtgtctcgtaat
tttaaagttgaaatgcaaaaccaacaaagccatcaatggtttgggccgttagattcacta
tacgacttggcttttgacaacaaatttaacaaccttaaacaactgaaaacgctgcttaaa
aacggtcgtttgtcattagagacgaaagtacgctgtaagactgattggttaccctgccaa
cttacggtgcgcagcctgcgtaatgccaaaggcaaagtagaagcattggtattcacgctc
atcgatcaaagtgtcgaactggagctgaaacgactcaactatgtcgctaaccatgaccaa
cttactggcctagccaaccgcgctaatgccgttcaccgcttgcaagagtcacacaacaat
ggtgagtcgcaaatggtgtgtttcatcgatctagatggctttaaagccatcaacgacgaa
cacggacacgcagtcggtgaccaattactttgtatggtaggtaaacgactcaccagttgt
cttgcacaagaagacatcgtctctcgccttgcgggtgatgagttcttgttgggaattaac
ggcatgtgctcttcaccctctattttcaaccgagtggtagagaaactctcaaccccgttt
atgattgatggtgtcgcatgccaagtgacagcaagtttaggtatcagctactggccagcc
actgacacgactagcctagaccaaaaaatcaccgaggcggatgaagcaatgtacatcgct
aaacgccaaggcaaaaatcagttctactgcttagatcatatccatgctcgaagcaatgaa
actgaggtaggacaatccgcataa
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