Vibrio scophthalmi: VSVS12_03905
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Entry
VSVS12_03905 CDS
T04650
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00470
D-Amino acid metabolism
vsc00550
Peptidoglycan biosynthesis
vsc01100
Metabolic pathways
vsc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSVS12_03905
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSVS12_03905
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VSVS12_03905
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
VSVS12_03905
Enzymes [BR:
vsc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VSVS12_03905
Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
Precursor biosynthesis
Amino acid ligase
VSVS12_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
SfsA
Motif
Other DBs
NCBI-ProteinID:
ANS87605
UniProt:
A0A1B1NV53
LinkDB
All DBs
Position
2:complement(972690..973682)
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AA seq
330 aa
AA seq
DB search
MNKTSILLLCGGGSSEHDVSLVSANYLQSQLQLTPEFEVTRIEMKKEGWFTDQGELALLD
SNTGQLNFADQSLHVDFVVPCIHGFPGETGDIQSLLELAGIPYLGCRAEASTNSFNKITS
KLWYDALGIPNTPYLFLSENNADAFEKTKQAFEKWGSVFVKAACQGSSVGCYKVTELKEL
QKAIDDAFSYSDQVLVEQAVKPRELEVAAYEYQGELVLTLPGEVKAPDNTFYSYEEKYSA
ASHSTTDVVAKNLTEEQIEAIRINAEKVFKQMKLRHLSRIDFFLTPEGNIYLNEVNTFPG
MTPISMFPKMLENNGHQFHQFLADCVKSSI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacatccattcttcttttatgcggcggcggctcatctgagcacgacgtttct
ttggtttctgcaaactacctacaatctcagctccagctaacacctgagtttgaagtgacc
cgtatagaaatgaagaaagagggctggtttactgatcaaggtgaattggctctgttagat
agcaacaccggccaacttaactttgctgatcaaagtttacatgtggatttcgtggtgcca
tgtattcatggtttcccgggagaaaccggtgacatccaatcgctattagaactggcagga
atcccatacctaggctgccgagcagaagcaagcaccaatagctttaacaaaattacgtcg
aagctttggtatgacgcactaggcattccaaatacgccataccttttcctatcagaaaac
aatgccgatgcctttgagaaaaccaagcaagcgtttgaaaaatggggcagcgtatttgtg
aaggccgcatgccaaggctcatcggttggttgttacaaggtaacggaattaaaagaactg
caaaaagcgattgatgatgcgttcagctattctgatcaagtattggtagagcaggccgtt
aaaccacgcgaattagaagtggcggcgtatgaatatcaaggcgagctcgtattaacccta
ccgggggaagtaaaagccccagataacactttctacagttacgaagaaaaatactctgca
gcaagtcattcaaccactgatgttgtagcgaaaaatttgactgaagaacaaattgaagcg
atccgcatcaatgctgaaaaagtgtttaaacagatgaagttacgccatttatcacgcatc
gacttcttcttaacaccagaaggtaacatctatctaaatgaagtgaataccttcccaggt
atgacaccgatttcgatgttccctaaaatgctggaaaacaatggccatcagttccatcaa
ttccttgcagactgtgttaaatcatcgatctaa
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