Vibrio mediterranei: BSZ05_12055
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Entry
BSZ05_12055 CDS
T04936
Name
(GenBank) exonuclease
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00540
Lipopolysaccharide biosynthesis
vsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BSZ05_12055
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsh01005
]
BSZ05_12055
Lipopolysaccharide biosynthesis proteins [BR:
vsh01005
]
Lipid A
BSZ05_12055
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GFIT
Motif
Pfam:
LpxR
ACP
Motif
Other DBs
NCBI-ProteinID:
ASI90448
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Position
1:complement(2565909..2566889)
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AA seq
326 aa
AA seq
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MKAASILPLIFVSSVALASERSTVSFSLDNDGVFGTDEDYTNGIFLSYTSSAITPWALFK
PLSLSYWGSSSLDKFEFQLGHKMWTPSDIEATVPLANDRPYAGYFHGELNYISLHPQQAQ
RFNLTLGSTGEGSFADKAQQLVHSIVGSADPKGWEYQIEDQVAGSIGYLTHLNWKREPLF
GDTGWEVSNVTEANLGNFRSDVSTGMMFRFGSELGGNFGSANISTENPFKAGMIGASNKG
WFTYFGLKARYRFNDLTIQGERPGIPEPSDAYDVTLQPWQGEAVLGVTWYNAYVGISAFA
GSKSAEYKEASKSIYGNGGLSLFAFF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcctccattttacctctgatttttgtcagcagtgttgccttagcctctgag
cgctctaccgtctcattttcactcgacaatgacggtgtttttggcacagacgaagactat
actaacggtatttttctttcttataccagcagcgccatcaccccttgggctttattcaaa
ccgcttagtctgtcttattggggaagctcttctcttgataagttcgaatttcagcttgga
cataagatgtggaccccttcggatattgaggccactgtacctctggctaatgaccgcccc
tatgcaggttattttcatggtgaactgaattacattagtttgcatcctcaacaggcacaa
cgttttaacctcactttaggtagcactggtgaagggtcatttgcagataaagcgcagcag
ttggtgcattcgattgtgggttcagcagacccaaaaggctgggaatatcaaattgaggat
caagtcgcaggcagtattggttacttaactcatctaaattggaagcgcgagccgcttttt
ggcgatactggatgggaagtctcgaacgtcaccgaagcaaacctagggaattttagaagt
gatgtttccacggggatgatgtttcgctttggttccgaacttggaggtaacttcggttct
gcaaacatcagtacagaaaacccgtttaaggccgggatgatcggcgcctctaataagggc
tggtttacttattttggcttaaaagctcgctaccgatttaatgatcttactattcaagga
gagagacctggaatacccgagcctagtgatgcttacgacgtcactttgcagccgtggcaa
ggtgaagcagttcttggtgtgacgtggtataacgcctatgttggtatcagtgcctttgcc
ggttctaagtcagctgaatataaagaagcgtcaaagtctatctatggcaatggaggactt
tcgctttttgctttcttctaa
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