KEGG   Vibrio mediterranei: BSZ05_22955
Entry
BSZ05_22955       CDS       T04936                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
vsh  Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_22955
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSZ05_22955
    Archaeal homologous recombinant proteins
     BSZ05_22955
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_29 AAA_27 AAA_21 AAA_16 ABC_tran
Other DBs
NCBI-ProteinID: ASI92637
LinkDB
Position
2:complement(1369300..1372344)
AA seq 1014 aa
MKPLKLTLQAFGPFSGKEIIDFSQLGDCPLFLINGPTGSGKSSILDAICYALYGETTGSE
RTGDQMRCDYADSKTLTTLVFEFELSGEKYEVTRSPDQEVPKQRGEGTTKRSHSATLLKL
SDNMLIANKPKQVGVAIQELLGLDVKQFRQVMVIPQGKFRELLTASSKERESIFGQLFQT
QVYTAIERTLFDKAAGIRKAKEEFDNQIKGALDVASLESLQQLNDSLDILSPNVERAKQE
LQVVEKRKNQAQQTYDQAQSLEKRFQAKINLEAEAKTLNDKRGEIALNKQIMTSHKQAIK
IKPTFDETIKLAQNMSTLSERIDIGRGKIQQAEKERGASITALEQQKVVNKRSEALNEES
YSLKQLEKALNQLDDKRREAQHADSQFNTYVEQHKQISDEVERLQAQTLTLEKSLSDAGK
EKQKLGEVTMSLNEQRKQCQSIETLKTLAANIVALQKQRNDTQSTVKNLSASAHAATRKR
TECEIAWHSSQASILAATLEEGTACPVCGSVEHPKLAAPSQETVSLQQLNELRANESSVN
VELNKQQQELVRLNSVLESAVLQRSDLINSLELEEAKLDQSAIETQNQITILENKISELN
KIDLSAMESRLNKHVNETSTKQELLNTLTNSVNKAAISKEQLRAVVVQLESNNKTGYANA
QLVLQRQASISDELTQLSQALEAAQRYANQTAETLVKYQSHLDTLTKQLNELSNEHASSV
ERWKTLLLSSDFSDEEIFLSSIVDERRIAELELELEAFVLDEVRVCEQLKLLTEELKDAE
HPNVQELLVAKNETDTSYQHMLGQYQQQQSKLDSLKNVLTRVNSLMSQNAELDKQYQVVG
TLSDVANGKTGNKISLHRFVLGVLLDDVLIQASQRLRLMSKGRYDLKRKETRSKGNAGSG
LDLIVEDAYTGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSL
DPESLDLAVQTLVELQQSGRTIGIISHVSELKEQMPLRLDVHASRIGSTVSLVN
NT seq 3045 nt   +upstreamnt  +downstreamnt
gtgaaacctttaaaactgactctgcaggcgtttggtccattctctggtaaagagattatt
gatttttctcagctaggtgattgcccgctttttcttatcaatggccccacaggctctgga
aaaagctcaatactggatgcgatatgctatgcgctttatggcgagaccactggaagcgag
cgtactggcgatcaaatgcgttgtgattatgccgatagtaaaacgctgactaccttggta
tttgagtttgaactgtcgggtgagaagtatgaggttactcgtagtcccgatcaggaagtt
ccaaaacagcgtggagaaggtacaacaaaacgaagccatagtgctacattacttaagctt
agcgacaacatgcttattgctaataaacctaaacaagtaggtgtcgcgatacaagaactg
ctaggacttgacgttaagcagtttcgacaagtgatggtgattcctcaaggaaagtttaga
gagttgctaaccgcaagttctaaagagagggaatctatctttggtcagttatttcaaaca
caagtctatacggcgatagaacgtactctttttgataaagcagcaggtattcgcaaagcg
aaagaggaatttgataatcaaattaaaggcgcattagatgtagcttctcttgaatcttta
cagcagctcaatgactctttagacatattatctcccaatgttgagcgagcaaagcaagaa
ttacaggtcgttgaaaagagaaaaaaccaagctcagcaaacatatgatcaagcgcagtca
ctagaaaagagattccaagctaagattaacttagaggctgaggcgaaaacgctaaacgat
aaacgtggagaaattgcactaaacaagcaaattatgacgagtcataagcaggcaataaag
attaaacctacttttgatgaaaccataaagcttgcacaaaacatgtcaactttatcggaa
cgtattgatattgggcgtggaaaaatccaacaagcggaaaaagaacgaggtgcgtctatt
actgctttggaacaacaaaaagtggttaataaaaggagtgaagcgctcaatgaagaaagc
tactccttaaagcagttagaaaaagctctgaaccaacttgatgataaaaggcgagaagct
caacatgctgacagtcaattcaacacatatgtagagcagcataaacaaatatccgatgaa
gtcgaacgacttcaggcgcagactctaacgcttgaaaaatctttaagtgacgctggaaaa
gagaagcagaaacttggtgaagtgacaatgtcactcaatgagcagcgaaaacaatgtcaa
agtattgaaacacttaaaacattagccgcgaatattgtagccttgcagaaacagcgaaat
gacactcaatctacggttaaaaacttgtcagcttcggctcacgccgctactcgcaagcgt
acagaatgtgaaatagcttggcattctagtcaagcctcgatactggccgcgactcttgaa
gaaggtaccgcgtgtccagtttgtggtagtgttgaacaccctaaactagcggcaccatca
caggaaaccgttagcttacaacagttgaatgaacttagagccaatgaatcgagcgtaaat
gtagagctaaacaagcagcaacaagagctagtaagactaaatagtgttctagaaagtgcc
gtattacagcgaagcgaccttataaattcattagagttagaagaggcaaagttagatcaa
tctgctattgaaacgcagaatcaaataacgattcttgaaaacaaaatcagtgagctcaac
aagattgatttaagcgctatggaatcgcgccttaacaaacacgttaacgaaacctcaact
aagcaagagttattaaacacgttaacgaattcagtcaataaagcggcaatttcaaaagag
caactgcgagcagtggttgtacaattggaatcgaacaacaagactggatacgctaatgcg
caattagtccttcagcgtcaagcttcaatctctgatgaactaacacagctttctcaggcg
cttgaagcagcacagcgctatgctaatcagacagcagaaaccttggttaaatatcagtct
catttagacacattaactaagcaattgaatgaattatcaaacgaacatgcttcttcagta
gaaaggtggaagacactactgttgagtagtgatttttctgatgaggaaatcttcttgtcc
tcgatagtagacgagcgccgtattgctgagcttgaacttgaacttgaggcatttgttcta
gatgaggtgagagtatgtgagcagctgaaactattaactgaagagttgaaagatgctgag
cacccgaacgtccaggaattgcttgttgctaaaaatgaaactgatacatcgtatcaacat
atgttaggtcagtaccaacaacagcaatctaaattggatagcttaaagaacgtattaact
agagtgaactcgttgatgtcgcaaaatgcagaacttgataagcaatatcaagtggttggg
actttaagtgacgtggctaatggtaaaacgggtaataaaattagtcttcatcgttttgta
ttaggcgtattgcttgacgacgtactcatccaagcatcacaaagattgagattgatgagt
aaaggtcgatatgatctaaaaagaaaagaaacacgaagtaaaggtaatgcagggtctggc
ttggatttgatagtagaggatgcatatacaggaaaatggcgtgatgtggcgacactttcg
ggtggtgagtcatttatggcagcgctttccttagcactagggttgtcagatgttgttcaa
tcctatagtggcggcattcgattggatacgctgtttatcgatgaaggattcggtagctta
gatccagagtcacttgaccttgcagttcagactctagttgagcttcaacaaagcggacga
acgattgggattatttcccatgtctccgaattaaaagaacaaatgccacttcgtctagat
gtccatgcatcgcgaattggtagtacagtaagtttggttaattaa

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