Vibrio mediterranei: BSZ05_22955
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Entry
BSZ05_22955 CDS
T04936
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_22955
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSZ05_22955
Archaeal homologous recombinant proteins
BSZ05_22955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_27
AAA_21
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ASI92637
LinkDB
All DBs
Position
2:complement(1369300..1372344)
Genome browser
AA seq
1014 aa
AA seq
DB search
MKPLKLTLQAFGPFSGKEIIDFSQLGDCPLFLINGPTGSGKSSILDAICYALYGETTGSE
RTGDQMRCDYADSKTLTTLVFEFELSGEKYEVTRSPDQEVPKQRGEGTTKRSHSATLLKL
SDNMLIANKPKQVGVAIQELLGLDVKQFRQVMVIPQGKFRELLTASSKERESIFGQLFQT
QVYTAIERTLFDKAAGIRKAKEEFDNQIKGALDVASLESLQQLNDSLDILSPNVERAKQE
LQVVEKRKNQAQQTYDQAQSLEKRFQAKINLEAEAKTLNDKRGEIALNKQIMTSHKQAIK
IKPTFDETIKLAQNMSTLSERIDIGRGKIQQAEKERGASITALEQQKVVNKRSEALNEES
YSLKQLEKALNQLDDKRREAQHADSQFNTYVEQHKQISDEVERLQAQTLTLEKSLSDAGK
EKQKLGEVTMSLNEQRKQCQSIETLKTLAANIVALQKQRNDTQSTVKNLSASAHAATRKR
TECEIAWHSSQASILAATLEEGTACPVCGSVEHPKLAAPSQETVSLQQLNELRANESSVN
VELNKQQQELVRLNSVLESAVLQRSDLINSLELEEAKLDQSAIETQNQITILENKISELN
KIDLSAMESRLNKHVNETSTKQELLNTLTNSVNKAAISKEQLRAVVVQLESNNKTGYANA
QLVLQRQASISDELTQLSQALEAAQRYANQTAETLVKYQSHLDTLTKQLNELSNEHASSV
ERWKTLLLSSDFSDEEIFLSSIVDERRIAELELELEAFVLDEVRVCEQLKLLTEELKDAE
HPNVQELLVAKNETDTSYQHMLGQYQQQQSKLDSLKNVLTRVNSLMSQNAELDKQYQVVG
TLSDVANGKTGNKISLHRFVLGVLLDDVLIQASQRLRLMSKGRYDLKRKETRSKGNAGSG
LDLIVEDAYTGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSL
DPESLDLAVQTLVELQQSGRTIGIISHVSELKEQMPLRLDVHASRIGSTVSLVN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctttaaaactgactctgcaggcgtttggtccattctctggtaaagagattatt
gatttttctcagctaggtgattgcccgctttttcttatcaatggccccacaggctctgga
aaaagctcaatactggatgcgatatgctatgcgctttatggcgagaccactggaagcgag
cgtactggcgatcaaatgcgttgtgattatgccgatagtaaaacgctgactaccttggta
tttgagtttgaactgtcgggtgagaagtatgaggttactcgtagtcccgatcaggaagtt
ccaaaacagcgtggagaaggtacaacaaaacgaagccatagtgctacattacttaagctt
agcgacaacatgcttattgctaataaacctaaacaagtaggtgtcgcgatacaagaactg
ctaggacttgacgttaagcagtttcgacaagtgatggtgattcctcaaggaaagtttaga
gagttgctaaccgcaagttctaaagagagggaatctatctttggtcagttatttcaaaca
caagtctatacggcgatagaacgtactctttttgataaagcagcaggtattcgcaaagcg
aaagaggaatttgataatcaaattaaaggcgcattagatgtagcttctcttgaatcttta
cagcagctcaatgactctttagacatattatctcccaatgttgagcgagcaaagcaagaa
ttacaggtcgttgaaaagagaaaaaaccaagctcagcaaacatatgatcaagcgcagtca
ctagaaaagagattccaagctaagattaacttagaggctgaggcgaaaacgctaaacgat
aaacgtggagaaattgcactaaacaagcaaattatgacgagtcataagcaggcaataaag
attaaacctacttttgatgaaaccataaagcttgcacaaaacatgtcaactttatcggaa
cgtattgatattgggcgtggaaaaatccaacaagcggaaaaagaacgaggtgcgtctatt
actgctttggaacaacaaaaagtggttaataaaaggagtgaagcgctcaatgaagaaagc
tactccttaaagcagttagaaaaagctctgaaccaacttgatgataaaaggcgagaagct
caacatgctgacagtcaattcaacacatatgtagagcagcataaacaaatatccgatgaa
gtcgaacgacttcaggcgcagactctaacgcttgaaaaatctttaagtgacgctggaaaa
gagaagcagaaacttggtgaagtgacaatgtcactcaatgagcagcgaaaacaatgtcaa
agtattgaaacacttaaaacattagccgcgaatattgtagccttgcagaaacagcgaaat
gacactcaatctacggttaaaaacttgtcagcttcggctcacgccgctactcgcaagcgt
acagaatgtgaaatagcttggcattctagtcaagcctcgatactggccgcgactcttgaa
gaaggtaccgcgtgtccagtttgtggtagtgttgaacaccctaaactagcggcaccatca
caggaaaccgttagcttacaacagttgaatgaacttagagccaatgaatcgagcgtaaat
gtagagctaaacaagcagcaacaagagctagtaagactaaatagtgttctagaaagtgcc
gtattacagcgaagcgaccttataaattcattagagttagaagaggcaaagttagatcaa
tctgctattgaaacgcagaatcaaataacgattcttgaaaacaaaatcagtgagctcaac
aagattgatttaagcgctatggaatcgcgccttaacaaacacgttaacgaaacctcaact
aagcaagagttattaaacacgttaacgaattcagtcaataaagcggcaatttcaaaagag
caactgcgagcagtggttgtacaattggaatcgaacaacaagactggatacgctaatgcg
caattagtccttcagcgtcaagcttcaatctctgatgaactaacacagctttctcaggcg
cttgaagcagcacagcgctatgctaatcagacagcagaaaccttggttaaatatcagtct
catttagacacattaactaagcaattgaatgaattatcaaacgaacatgcttcttcagta
gaaaggtggaagacactactgttgagtagtgatttttctgatgaggaaatcttcttgtcc
tcgatagtagacgagcgccgtattgctgagcttgaacttgaacttgaggcatttgttcta
gatgaggtgagagtatgtgagcagctgaaactattaactgaagagttgaaagatgctgag
cacccgaacgtccaggaattgcttgttgctaaaaatgaaactgatacatcgtatcaacat
atgttaggtcagtaccaacaacagcaatctaaattggatagcttaaagaacgtattaact
agagtgaactcgttgatgtcgcaaaatgcagaacttgataagcaatatcaagtggttggg
actttaagtgacgtggctaatggtaaaacgggtaataaaattagtcttcatcgttttgta
ttaggcgtattgcttgacgacgtactcatccaagcatcacaaagattgagattgatgagt
aaaggtcgatatgatctaaaaagaaaagaaacacgaagtaaaggtaatgcagggtctggc
ttggatttgatagtagaggatgcatatacaggaaaatggcgtgatgtggcgacactttcg
ggtggtgagtcatttatggcagcgctttccttagcactagggttgtcagatgttgttcaa
tcctatagtggcggcattcgattggatacgctgtttatcgatgaaggattcggtagctta
gatccagagtcacttgaccttgcagttcagactctagttgagcttcaacaaagcggacga
acgattgggattatttcccatgtctccgaattaaaagaacaaatgccacttcgtctagat
gtccatgcatcgcgaattggtagtacagtaagtttggttaattaa
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