Vibrio atlanticus: VS_1626
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Entry
VS_1626 CDS
T00812
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_1626
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VS_1626
Archaeal homologous recombinant proteins
VS_1626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CAV18805
UniProt:
B7VP62
LinkDB
All DBs
Position
1:complement(1743960..1745213)
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AA seq
417 aa
AA seq
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MKILHTSDWHLGQNFYNKSRKNEHERFLQWLLEQVTEHNIDAIIVAGDIFDTSTPPSYAR
EMYNKFVVDSSKIGCQLVLLGGNHDSVSVLKETQQLLKYMGADVIPNTNEDHATQVVELK
GKNGDVEALVCAIPFIRPRDVLTSQAGVTGVERQKQLGDAIKQHYQSVYDAALEKRATFE
NSEHMPIIATGHLTAMGVQQSDSVRDIYVGNLDGFAADGFPDADYIALGHIHRPQVVAKR
EYIRYCGSPIPLSFDELKSQKQVCVVEFVEGVRTICQLPVPTFQPLAEIKGDLSEIESQL
NQYIGLDSEQSVWLSIEVQAQDYLSDLQERMRSLTDGLNVEVLQLRRARERRNQALEQES
AETLSELSPMDVFSKRIALEEFETDSEKARLERMTVKFKQVMVEVSESAQTPNKVEE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttcacacgtccgattggcaccttggccaaaacttctacaataaaagccgt
aagaatgaacatgaacggtttttacaatggttacttgagcaagttactgagcacaacatc
gacgcgatcattgttgctggcgatatttttgataccagcacaccgccgagttacgctcgt
gagatgtataacaagtttgtggtcgactcgagcaagatcggctgccaattggtgttgtta
ggtggaaatcacgattcggtgtctgtgcttaaagagacacaacagctgctcaaatacatg
ggcgccgatgtgattcctaataccaatgaagatcatgcgactcaggttgtcgaactaaaa
ggcaagaacggcgatgtagaagcgctggtttgtgccattccctttattcgccctcgcgat
gtgttgaccagccaggcgggtgttactggtgtagagcgtcagaagcaactcggcgatgca
atcaaacagcactaccaaagtgtttatgatgccgctttagaaaaacgtgcgacgtttgaa
aacagcgagcacatgccgattatcgctactggtcatttaacagcgatgggtgttcaacaa
tcggattctgtgcgtgatatctatgtcggtaaccttgatggtttcgccgctgatggtttc
ccagatgccgattatattgcacttggtcatatccaccgcccacaagttgtggcaaaacgt
gaatacattcgttactgcggttcaccaatcccattaagctttgacgaacttaaatctcaa
aagcaggtatgtgtggttgaatttgttgagggcgtgcgaaccatttgtcaattgcccgtt
cctacattccaacctctagctgaaatcaaaggcgacttgagcgagatcgaatctcagctg
aaccaatacataggtttagatagcgaacaaagcgtgtggttatcgatagaagtgcaagcg
caagattacttgtcggatctacaagagcgcatgcgctcattaactgacggtttgaatgtg
gaagtacttcaactgcgccgcgcaagagagcgtcgtaatcaagcattagagcaagagtcg
gcagagaccttatctgaactgagcccgatggacgtgtttagcaagcgtattgccttagaa
gagtttgaaaccgattctgaaaaagcacgtttagagcgaatgacggtgaagtttaaacaa
gtgatggttgaagtgtctgaaagcgctcaaacaccaaacaaagtagaagagtaa
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