Vibrio atlanticus: VS_2105
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Entry
VS_2105 CDS
T00812
Name
(GenBank) hypothetical transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
vsp
Vibrio atlanticus
Module
vsp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsp03000
]
VS_2105
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
vsp01504
]
VS_2105
Transcription factors [BR:
vsp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VS_2105
Antimicrobial resistance genes [BR:
vsp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VS_2105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_11
HTH_40
HTH_23
LacI
HTH_7
DUF218
TetR_C_11
Phage_terminase
TnsD
GerE
HTH_29
UPF0122
HTH_22
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CAV19280
UniProt:
B7VH80
LinkDB
All DBs
Position
1:2261397..2262011
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AA seq
204 aa
AA seq
DB search
MTKIIKSEQKRSQILTAASQLFSEHGFKINMDQIAKAANVSKQTVYSHFKNKDELFETCM
QTKCAERELSPAAFDMDAAVGDELVKFGVKFQDLLLDEQSRQTFQNAISQANTHPEIASI
YLETGPQKTTKLLADYLQSKIDSGDLTLSTSSSPVIAARQLLLMFHGKSAYWGFFGHDSG
ESEEERLHYTRECVALFLNGNQPR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaaatcatcaagagtgaacagaagagatcgcagatcttaaccgcagccagccaa
cttttctctgaacatggcttcaagatcaatatggatcagatagccaaagcagcgaacgtt
tctaagcaaacggtctactctcactttaaaaacaaagacgaacttttcgaaacctgcatg
caaaccaagtgtgcggagcgagaactcagtcctgcagcctttgatatggatgctgcggtg
ggtgatgagttggtgaagtttggtgtgaagtttcaggatttattacttgatgaacaatct
agacaaacctttcaaaatgccattagccaagcgaatacgcatccagagatcgcctctatc
tatttagaaactgggcctcagaaaaccaccaaattacttgctgattatttgcagtcgaaa
atagattctggtgatctcacactgtcgacatcaagctcgccagtcattgcagccagacaa
ctgctgcttatgttccatggtaaatcagcgtattggggattcttcggacacgatagcgga
gaatctgaagaagaaagacttcactacactcgcgaatgtgtcgcgctgttcttaaacggc
aatcagcctcgttaa
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