Vibrio atlanticus: VS_2357
Help
Entry
VS_2357 CDS
T00812
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_2357
Enzymes [BR:
vsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
VS_2357
Transfer RNA biogenesis [BR:
vsp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VS_2357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF2202
Motif
Other DBs
NCBI-ProteinID:
CAV19518
UniProt:
B7VIS2
LinkDB
All DBs
Position
1:complement(2527324..2528082)
Genome browser
AA seq
252 aa
AA seq
DB search
MRVMLEIIYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHVFPLHRLDRPT
SGVLVFALSSEVASEVMPMFANHEMQKTYHAIVRGWIEEGDTLDYALKVELDKIADKFAK
EDKEPQEAVTVYEPLAKVEVPYSTGRFPTSRYCLVEMMPKTGRKHQLRRHMAHLRHPIVG
DTSHGDGKHNRLFRDDLDSHRLLLHASELSFIHPFTKEELVMKANLDETWLRLFETFEWD
ANLIGAKACSSK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaatgttagagatcatttatcaagatgagtattttgtcgcggtgaataagcct
gcgggtatgctagtgcatcgctcatggttggataaacacgagactcagtttgtgatgcag
actctgcgcgaccaaattggtcagcacgtatttcctctgcatcgcttagaccgtccaacg
tctggcgtattggtgtttgctctgtcgagtgaagttgcctctgaggtgatgccgatgttc
gccaaccacgagatgcaaaaaacctatcatgcgattgtgcgtggttggatagaagagggc
gatacgctcgattatgcgcttaaggttgagctggataagatcgccgataagttcgcgaaa
gaagataaagaaccacaagaagccgtcactgtttacgagccgttagcgaaagtcgaagtg
ccgtattcaacaggccgttttcctaccagtcgttattgcttagttgagatgatgccaaag
acaggacgtaaacatcagctgcgtcgtcacatggctcatctaagacacccaatcgtgggc
gatacttcacatggtgatggtaagcataaccgactgttccgtgatgatttagactcacac
cgtctgttgctgcatgcttctgaattgagcttcattcatcctttcactaaagaagaattg
gtgatgaaggcgaacttagatgaaacgtggttaaggttgtttgaaacttttgagtgggat
gccaacttaatcggtgctaaggcgtgttcgtctaagtaa
DBGET
integrated database retrieval system
