Vibrio spartinae: Vspart_00937
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Entry
Vspart_00937 CDS
T07037
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
vsr
Vibrio spartinae
Pathway
vsr00230
Purine metabolism
vsr00240
Pyrimidine metabolism
vsr01100
Metabolic pathways
vsr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Vspart_00937 (ygdH)
00240 Pyrimidine metabolism
Vspart_00937 (ygdH)
Enzymes [BR:
vsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
Vspart_00937 (ygdH)
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Gene cluster
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Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Glycos_transf_2
Ribonuc_L-PSP
Motif
Other DBs
NCBI-ProteinID:
QMV13697
UniProt:
A0A1N6M8H2
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Position
1:complement(995801..997165)
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AA seq
454 aa
AA seq
DB search
MITHISPTGSMDLLSQIEVERLKKTASSGDLYQLYRNCTLAVLNSGSHTDSSKELLDKYQ
NFDVNVLRRERGIKLELIEPPEHAFVDGEIIKGIQEHLCSVLRDIVYVNMHVADSKRYHQ
VDSVYNTNLVFDILRNARTLVPGLTPNLVVCWGGHSINPVEYQYTREVGNELGLRELNIC
TGCGPGAMEGPMKGAAIGHAKQRYKNARYIGLTEPSIIAAEPPNPIVNELIIMPDIEKRL
EAFVRMAHGIVIFPGGPGTAEELLYILGIMMHPDNAEQPLPIILTGPKGSEDYFNSIDQF
ISETLGEAARKHYQIIIDDPARVARKMNESMPVVRQFRKAHGDAYSFNWSLKIDPEFQLP
FVPNHHAMANLDLHMNQKPEVLAANLRKAFSGIVTGNVKAEGIREIEQHGPFIIDGEPAI
MQKMDKLLKDFVKQNRMKLPGGQAYEPCYKIANK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgattactcatatcagcccgaccggaagtatggatctgctctcgcagattgaagttgaa
cgcctgaagaaaaccgcatccagtggggatctataccaactttacagaaactgtacactt
gctgtcttgaattctggcagtcacaccgacagctctaaagagctcctggataaatatcag
aactttgatgtcaacgtcctcagacgggaacggggcatcaaactagaacttatcgaacca
cctgaacatgccttcgttgatggcgaaatcatcaaaggaattcaagagcacctttgttct
gtattacgggatattgtttatgtcaacatgcatgtcgcagacagcaaacgctatcatcag
gtcgattcagtctataacaccaatttagtgttcgatatcttacgtaatgctcggacactc
gtgccgggactgacgccaaacctcgtagtctgctggggcggtcattcaatcaacccggtt
gaataccaatatacccgggaagttggtaatgaactcggactacgcgagctcaatatctgt
acgggttgtggcccgggagctatggaaggtccgatgaaaggggcggcaatcggccatgcg
aaacaacgttataaaaatgcacgctatattggcctgaccgaaccttcaatcatcgcggcc
gagccaccaaatccgatcgttaacgagctgatcatcatgccagacatcgaaaaacgtctg
gaagcatttgtccgcatggcgcacgggattgtgattttccccggaggtcccggtacggct
gaagaactgttatatattctcggtatcatgatgcatccggataatgccgaacaaccccta
ccgattattctgaccggcccgaaaggtagtgaagactattttaactcaatcgatcaattt
attagtgaaacgttgggagaagcggctcgcaaacactatcaaattatcattgatgatccc
gcgagagtcgcgcgcaaaatgaatgagtcaatgccggttgtccgccagttcagaaaagcg
catggtgatgcttacagtttcaactggtcactcaaaatcgatccagagtttcagttacca
tttgtgccaaatcatcatgcaatggcgaatcttgatcttcacatgaaccagaaaccggaa
gtgcttgcagcgaacctacgcaaggcgttttcaggtattgtgacaggaaatgtcaaagcg
gaaggcattcgggaaatcgaacaacatggtcctttcatcatcgatggagagccggctatc
atgcaaaaaatggacaagctcttgaaagacttcgtcaaacaaaaccgcatgaaactgccc
ggcggacaggcttatgaaccctgctataaaattgccaacaagtag
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