Varunaivibrio sulfuroxidans: P3M64_00090
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Entry
P3M64_00090 CDS
T08892
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsu03009
]
P3M64_00090
Enzymes [BR:
vsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
P3M64_00090
Ribosome biogenesis [BR:
vsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
P3M64_00090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Rad52_Rad22
Motif
Other DBs
NCBI-ProteinID:
WES30812
LinkDB
All DBs
Position
21826..22821
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AA seq
331 aa
AA seq
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MSDTVNPDHSDTTYSVLVDEDKGRVRLDKILAEALTDLSRSRIKSLLEQGCVTREGGGVV
GDPSLKVKSGDVYRVYVPPPVAALPQAQDIPLDVVFEDDDLIVFDKPPGLVVHPAAGNPD
GTVVNALLHHCRGSLSGVGGVSRPGIVHRLDKGTGGLMVAAKTDLAHQGLSRQFADHSLQ
RAYYAVVWGVPVQTQGEIVGAIGRNPRDRKKMAIVEKGGKHALTRYRVLRTFGRAASLVE
CRLLTGRTHQIRVHMAAIGHPVMGDPVYATFTRARKESVSDAAKNALSAQHYQLLYAYII
GFKHPKSGEKLYFEKELPMYINGIIKKLDIC
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacaccgtgaacccagaccatagcgataccacttatagcgttctcgttgacgag
gacaaggggagagtgcgcctggataaaattcttgccgaggcgttgaccgatctttctcgt
tcccggatcaaatctctgcttgagcaaggctgcgttactcgggagggtggcggggtcgtc
ggcgatccgtcactcaaggtcaaatcgggggatgtctaccgcgtctacgtcccgcctccg
gtcgccgccttgccccaggcgcaggatattccccttgatgtcgtgttcgaggacgacgac
ctgatcgtcttcgacaagccgccgggcctcgtggtgcaccctgcggcgggcaatcccgac
ggcaccgtcgtcaacgcccttttgcatcattgccgaggttcgttgtcgggggtcggtggg
gtgtcgcgtccgggaatcgttcatcggttggataagggcacgggcggcctgatggtcgcc
gcgaaaaccgatctcgcccatcaggggctcagccgtcagttcgccgatcacagtttacag
cgggcatattacgccgtcgtttggggcgttccggtgcaaacccagggagaaatcgtgggg
gcgatcggacgcaaccctcgtgaccgaaaaaaaatggcgattgtcgaaaaaggcggcaag
cacgcgcttacccgttaccgggtgctcaggactttcgggcgggcggcatcgctggtcgaa
tgccgcttgttgaccgggcggacacaccaaatacgggttcatatggcggctattggtcac
ccggtgatgggtgatcccgtctatgcgacgtttacccgcgcacgtaaggagagcgtttca
gatgcagccaaaaatgccttgtccgcgcaacattatcagcttttatatgcttatattatt
ggattcaaacatccgaaaagtggtgaaaaactctattttgaaaaagaattaccaatgtat
atcaatgggataattaaaaaattagatatttgttaa
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