Varunaivibrio sulfuroxidans: P3M64_00095
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Entry
P3M64_00095 CDS
T08892
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsu03021
]
P3M64_00095 (rpoH)
Transcription machinery [BR:
vsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P3M64_00095 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WES30813
LinkDB
All DBs
Position
22949..23845
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AA seq
298 aa
AA seq
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MSTCTTAVSQGLSLSPEHNLTRYLQDIRKFPMLSVEEEQRLARLWCDSQDDDAAHQLVNS
HLRLVAKIAMGYRGYGLPLGELISEGNVGMMQAVQRFDPDRGFRLSTYAMWWIRASIQEY
ILHSWSLVKIGTTAAQKKLFFNLRKMKGELKSLEDGDLAPENVAIIAHRLKVSEEDVISM
NRRMSAPDSSLNTVVRDEGDDEWLDWLSDESPDQEDTLGQSEELLSRRSLLKGAMKGLSE
RERSILSERRLKDSPATLENLSQQYGISRERVRQIEVRAFEKLQKSVRNAVIEQNIAC
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtgcacaaccgctgtctctcagggattgagcctttcccccgaacacaatctt
acccgttatctccaggacattcgtaaatttcccatgctctccgtcgaggaggagcaacgc
ctcgcgcgcttgtggtgcgactcccaagacgacgacgctgcgcaccaactggtgaacagt
catttgcgtcttgtggcgaaaatcgccatgggctatcgcggttacggcttgcctttgggc
gagttgatctccgaaggcaatgtcggcatgatgcaggccgtgcagcggttcgacccggat
cggggcttccgtttgtcaacgtacgccatgtggtggatacgcgcctccattcaggaatat
atcctgcattcgtggtccttggtgaaaatcggaaccacggcggcgcagaaaaaattattt
ttcaatttgcgtaaaatgaaaggcgagttgaagtctcttgaggatggcgatctcgcccct
gagaatgtcgccattatcgcccatcgcttaaaggtaagcgaggaagacgtcatttccatg
aaccggcggatgtccgcgccggacagctccctcaacacggtggtgcgcgacgaaggcgat
gacgagtggctcgattggttgagtgacgaaagcccggatcaagaagacaccctgggtcaa
tccgaggaactgttgtcgcgtcgttcgcttctgaagggcgccatgaaggggttgagcgaa
cgggaacggtcgattttgagcgagcgtcgtctgaaagatagtcccgcgacgcttgaaaac
ctcagccagcaatacggaatttcccgtgaacgtgttcgccagatcgaggtgcgcgccttc
gagaagttgcagaaatcggtacgcaatgccgtgatagaacaaaacatcgcatgttga
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