Vibrio syngnathi: K08M4_22570
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Entry
K08M4_22570 CDS
T09193
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsy03016
]
K08M4_22570 (truC)
Enzymes [BR:
vsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
K08M4_22570 (truC)
Transfer RNA biogenesis [BR:
vsy03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
K08M4_22570 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF2202
Motif
Other DBs
NCBI-ProteinID:
ARP38990
UniProt:
A0AA34TQ87
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Position
1:complement(2469697..2470446)
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AA seq
249 aa
AA seq
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MLEIIYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHVFPLHRLDRPTSGV
LVFALSSEVASEVMPMFANHEMQKTYHAIVRGWIEEGDTLDYALKVELDKIADKFAKEDK
EPQEAVTVYEPLAKVEVPYSTGRFPTSRYCLVEMMPKTGRKHQLRRHMAHLRHPIVGDTS
HGDGKHNRLFRDDLDSHRLLLHASELRFIHPFTKEELVMKANLDETWLRLFETFEWDTSL
VNAEACLSK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcatttatcaagatgagtactttgtcgcggtgaataagcctgcgggtatg
ttagtgcatcgctcatggttggataaacacgagactcaatttgttatgcagacactgcgt
gatcaaattggtcagcatgtatttcctctgcatcgtttagacagaccaacatctggcgta
ttggtgtttgctctgtcgagtgaggttgcctctgaggtgatgccgatgttcgccaaccat
gagatgcaaaagacttatcatgcgattgtgcgtggctggatagaagagggcgatactctc
gattatgcactaaaggttgagctggataagatcgcggacaagtttgcaaaagaagataaa
gaaccacaagaggccgtcaccgtttacgagccgttagcgaaagtcgaagtgccatattca
acggggcgttttcctaccagtcgttactgcttagttgagatgatgccaaagacaggccgc
aaacatcagctgcgtcgtcacatggctcacctaaggcacccaatcgtgggcgatacttcg
catggtgatggtaagcataaccgactgtttcgtgatgatttagactcacaccgtctgttg
ctgcatgcttctgaactgcgcttcattcatcctttcactaaagaagagttggtgatgaag
gccaacctagatgaaacttggttaaggttgtttgagacttttgagtgggataccagcttg
gtgaatgctgaagcatgtttgtctaagtaa
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