KEGG   Vibrio syngnathi: K08M4_23200
Entry
K08M4_23200       CDS       T09193                                 
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
vsy  Vibrio syngnathi
Pathway
vsy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    K08M4_23200 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_23200 (recB)
Enzymes [BR:vsy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     K08M4_23200 (recB)
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     K08M4_23200 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 SLFN-g3_helicase AAA_11 AAA_25 AAA_12 ResIII
Other DBs
NCBI-ProteinID: ARP39053
UniProt: A0AA34TRS5
LinkDB
Position
1:complement(2534526..2538200)
AA seq 1224 aa
MTTTSSAQVIVPQTLDTMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGTAAPQGDL
TEATRHHEELTVDQILVVTFTEAATAELRDRIRARIHDARIAFARGQSDDPVISPLLQAI
DDHAGAAKTLLNAERQMDEAAVYTIHGFCQRMLTQNAFESGSRFDNEFVTDESHLKAQVV
ADYWRKQFYPLPIQLAGEVRNIWGSPASLLADVNRYLTGSPLKLTVEAMSGDLQTLHNQN
LDKVKQLKALWCESEADFLALISGSDVNKRSYTKKSLPTWLEAVTAWAQSDTNDYQFPDK
LEKFSQATLIEKTPKGTAPQHAVFEAIEDFLSSPADLKAPLLAHAITHCRTMLAKAKQQK
QWLSFDDLLTQLSASIDVDEQSLLVERIRTLYPVAMIDEFQDTDPLQYSIFSRIYLDNPQ
CGLFMIGDPKQAIYGFRGADIFTYIKARNQVSAHYTLGTNWRSSADMVSAVNQVFMNSDS
PFIYDQDIPFLPVAASPSADKRQWVMNGETQHALTFWLQDAEDKPLPKGEYHKAMAEATA
SQIQTILTASQNQQAYFDNGKKQHAVNAGDIAVLVRTGSEGRLIKNALSEQGIASVYLSN
RDSVFTSLVAQDIQRLLQAVLTPENDRALRASLASELFALDAASLDELNNDEVVWENVVN
EFREYRKLWLQRGVLPMLRSVISKRHLAERLLEEENGERSLTDLMHIGELLQQARQELDS
DYGLLRWLAEAISDAQNGLGGSDDDIQRLESERNLVQIVTIHKSKGLEYDLVFLPFVASY
REASEGKFYDHDSDTTVLDITGSDSALAQADKERLAEDLRLIYVALTRAVYGCFIGMAPL
RKGRSTKEPTGVHLSAMGYLIQNGQEQGIAELHQALSAIEGKNPSVLLSETPTAHEQVFV
QTEQVSDDLQANELKASIDRAWRITSYSGLVKQGSHGASHDATIEVSGFDIDSADEHDES
ELIEPERSIFTFPRGARPGTFLHTLFEDVEFTEPATSEHNTQVITHLLESEQYELEWLPV
LQQLVDTVLNTALDGKNLKLSEKDSTQRLVEMEFLLPIEVLAASELNQTIQYHDPLSAKA
GDLGFQTVQGMLKGFIDLVFEHQGKYYVLDWKSNHLGDDVAVYHGEALKSAMADHRYDLQ
YQIYALALHRFLRSRVADYSYEQHFGGVYYLFLRGMDGQSQQGVFSAKPTLALLDEMDQL
IDGKVIDRRSAQLNDNETGQMGLL
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgacgaccacaagcagtgctcaggtaatcgttccacaaacacttgataccatgacgttt
ccacttcatggcgcgcgtttaattgaagcatcagcgggtacgggtaaaacatttactatt
gctggcttgtatttacgcttactgctcgggcacggaactgctgcgccgcaaggcgatctg
acggaagctactcgacaccatgaggagctaaccgtagaccaaatattggtggtgaccttt
actgaagccgcaacggcagagctacgcgatcgtatccgtgcgcgaatccatgatgcacgt
atcgcgtttgctcgcgggcaaagtgacgatccagtgatttcccctttgttacaagctatc
gatgatcatgctggtgcggcgaaaactctgctcaatgctgaaagacaaatggatgaggcg
gcggtatacaccattcacggcttctgtcagcgtatgctgactcaaaatgcctttgagtct
ggaagccgttttgataatgaatttgtgaccgatgaaagtcaccttaaagcgcaagtggta
gctgactattggcgtaagcagttttacccgctgccaattcaactggcgggtgaagtgcga
aatatttggggctctcccgcttcgttattggctgacgtaaatcgctacctgacgggctct
ccactaaagctaactgtggaagcaatgtcgggtgacttgcaaactctgcacaatcaaaac
ctagataaagtgaagcaacttaaggcgttgtggtgtgaatctgaagcggactttttggct
ttgatttcaggttcagatgtgaacaagcgcagctacactaagaagtctttgcctacttgg
ttagaagcggtaacagcatgggcgcagagcgacaccaatgattaccagttcccagataaa
ttggagaagttctcacaagccacgttaattgaaaaaacaccgaaaggcacggcacctcag
cacgccgttttcgaagcgattgaggacttcttaagttctcctgcagacctgaaagcccct
ttgttggcacatgcgattactcattgtcgaaccatgttagctaaggcaaaacagcagaaa
cagtggttatcgtttgatgatttgttgactcagttatcagcgtcgattgatgtggatgag
caatcattgctggtggaaaggattcgcacgctttacccggtggcgatgatcgatgaattc
caagataccgatccgctgcaatacagtatttttagccgaatctatctcgataatccgcag
tgcggcttgtttatgatcggtgacccgaagcaggctatctatggcttccgtggcgcggat
atctttacctacattaaggcaagaaaccaagttagtgctcactatacgttaggcactaac
tggcgttcgagtgcggatatggtcagcgcggtaaaccaagtgtttatgaattcggacagc
ccgtttatctacgaccaagacattccattcttacccgttgctgccagtccatcggccgat
aaacgccaatgggtgatgaacggagaaactcagcacgcactcaccttttggctgcaagat
gctgaagataagcccttaccgaaaggcgaatatcacaaggcaatggctgaggcgacggcg
agtcaaattcaaaccattctgaccgcttctcaaaaccagcaagcctattttgataacggt
aaaaaacaacatgccgtgaatgccggtgatattgctgtcttggttcgaaccggtagtgaa
ggtcgcctaattaaaaatgcgttgtcggaacaaggcattgcgagcgtgtatttgtctaac
cgagatagcgtgttcaccagcttggtcgcacaagacattcaacgcctactgcaagcggtg
ctgacgcctgaaaatgaccgtgcattgcgtgcgagtttagcgtcagagttgtttgctttg
gatgccgcatcattggatgaactcaacaacgatgaagtggtttgggaaaatgtcgttaac
gaattccgagaatatcgtaagttgtggctgcaacgtggcgtattaccaatgcttcgcagc
gtgatcagtaaaaggcacctcgcggaacgcttactagaagaagaaaatggtgagcgctca
ctcactgatttgatgcacattggcgaactgttgcaacaagctaggcaggagctcgacagc
gactatggcttgttacgttggctagcagaagcgatatcagatgcgcaaaatggtttaggt
ggaagcgatgatgacatccaacgccttgaatcagaaagaaacttggttcaaatcgttacg
attcataagtcgaaaggtctggaatatgatttagtattcttgccgtttgtcgcgagttac
cgtgaagcgagtgaaggtaagttctacgatcacgattcagataccacagtacttgatatt
actggtagcgacagtgccttagcacaagccgacaaagagcgattagcagaagacctacgt
ttgatttacgtggcgctgactcgtgctgtttatggatgtttcattggcatggcaccgctg
cgtaaagggcgttcaaccaaagaaccaactggcgttcacttgagtgctatgggctacttg
attcaaaacggacaagagcaaggcatcgccgagttacatcaagctctgtcagcaattgag
ggtaagaatccaagcgtgctgctgtctgaaacgccgactgctcacgaacaagtctttgtg
caaacagaacaagtgagtgacgacttgcaggccaatgaacttaaagcttcaattgaccga
gcttggcgtattaccagttactcggggcttgtaaagcaaggcagtcacggtgcgagccat
gatgcgaccattgaggtgtctggcttcgatattgactctgccgatgagcacgatgagtca
gaactgattgagcctgaacgttctatattcacgttccctcgcggtgctcgccctggtact
ttcttacacaccttgtttgaggatgttgaatttaccgagccagcaaccagcgaacataac
acgcaagtaatcactcacttattagagtcggagcaatacgaactagagtggttaccagtg
cttcaacaactggttgatacggtgctgaacacggctttagatggaaagaacttaaagctg
agcgagaaagactcaacgcaacgattggttgagatggaattcttgttgccgatcgaagtg
ctcgccgcatctgaattgaatcaaaccattcaatatcacgatccgctatcagcaaaagcc
ggtgaccttggctttcaaaccgtgcaaggcatgttgaaaggctttatcgatttagtgttt
gagcatcaaggtaaatactatgtgctcgactggaaatcgaaccatctaggtgatgacgtt
gccgtctaccatggtgaagcattgaaatcggcgatggcagaccaccgatacgatctgcaa
tatcaaatctatgcgttggccttacatcgcttcttacgcagccgcgttgcggattacagt
tatgaacaacattttggtggggtttattacttgttcttaagaggaatggacggccaatct
caacaaggtgttttctcggctaaacctacattggctctgctcgatgaaatggatcaattg
attgacggtaaagtgatagacagacgttcagcacaattgaatgacaatgaaactggacag
atggggcttctataa

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