Vibrio syngnathi: K08M4_37060
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Entry
K08M4_37060 CDS
T09193
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00470
D-Amino acid metabolism
vsy00550
Peptidoglycan biosynthesis
vsy01100
Metabolic pathways
vsy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K08M4_37060 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K08M4_37060 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K08M4_37060 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
K08M4_37060 (ddl)
Enzymes [BR:
vsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K08M4_37060 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
Precursor biosynthesis
Amino acid ligase
K08M4_37060 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
ATPgrasp_ST
DUF4355
Motif
Other DBs
NCBI-ProteinID:
ARP40367
UniProt:
A0AA34TT11
LinkDB
All DBs
Position
2:complement(808074..809069)
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AA seq
331 aa
AA seq
DB search
MNTTNILLLCGGGSSEHEVSIVSANYLFEQLNSVADFNVVRVEIKNEGWCLDSGELVYLD
INDQTLRGDNLESKVDFIVPCIHGFPGETGDIQSLFEMAKIPYLGCGSEASNNSFNKITS
KLWYDALGIPNTPYLFLSDNTEQAHEQATQAFESWGKVFVKAARQGSSVGCYQVNQVEDL
SEAINKAFTFSDQVLIEKSVVPRELEVAAYEIDGELQISKPGEVIAPNGAFYSYEEKYSA
DSHSITEVEATNLTDEQRELITDSARKVFTQMKLRHLSRIDFFLTQDNEIYLNEVNTFPG
MTPISMFPKMVEHDGHKFSQFLENCVRTSLA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccacaaacatccttctactttgcggcggtggatcttcagagcatgaagtgtct
atcgtttcagccaattacctttttgaacaacttaatagcgttgcagattttaacgttgtg
agagttgaaattaaaaacgaaggctggtgtcttgattctggtgagttggtttatcttgat
attaacgatcaaaccttacgtggcgacaacttagaatctaaagtcgatttcattgtccct
tgtattcatggtttccctggcgaaacaggtgacattcaatcactgtttgaaatggctaag
attccgtacctaggttgtggttctgaagcaagcaacaacagcttcaataaaatcacatca
aaactttggtacgacgctctgggtatcccaaatacgccgtatctgttcttgtcagataac
actgaacaagctcatgagcaagcaacacaagcctttgaaagttgggggaaagtgttcgtc
aaagcggctcgtcagggatcttccgttggctgctaccaagtcaatcaagtagaagattta
agtgaagcaatcaacaaggcatttaccttttctgatcaagtacttattgagaaatcagtg
gtgccaagagagctagaagttgccgcttatgaaatcgatggcgagctacagataagtaag
ccaggcgaggtgattgcacctaatggcgcattttactcttacgaagagaagtacagtgca
gacagccactcaattactgaagttgaagcaactaacttaaccgatgaacaacgtgaattg
attacagacagcgcccgcaaggtattcacacagatgaagcttcgtcacttgtctcgtatc
gatttcttcctaacacaagacaatgagatctacctgaacgaagtgaataccttcccaggt
atgacgccaatttccatgttcccaaaaatggttgaacatgatggccacaaattcagccag
ttcttagagaactgcgtgagaacgagccttgcttag
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